RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 TUBB4BP68371 445 aa12.21□□□□□ -0.46
KPNA3-201ENST00000261667 LACTBP83111 547 aaPredicted RBP12.21□□□□□ -0.46
KPNA3-201ENST00000261667 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.46
KPNA3-201ENST00000261667 ZNF365Q70YC5 407 aa12.21□□□□□ -0.46
KPNA3-201ENST00000261667 MYOM1P52179 1685 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 DAAM2Q86T65 1068 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 VCXQ9H320 206 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 DACT1Q9NYF0 836 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 EVC2Q86UK5 1308 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 SEC31AO94979 1220 aaKnown RBP12.2□□□□□ -0.46
KPNA3-201ENST00000261667 PNMA6AP0CW24 399 aaPredicted RBP12.2□□□□□ -0.46
KPNA3-201ENST00000261667 PAFAH1B1P43034 410 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 ZSCAN31Q96LW9 406 aaPredicted RBP12.2□□□□□ -0.46
KPNA3-201ENST00000261667 DACH1Q9UI36 760 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 BIN1O00499 593 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
KPNA3-201ENST00000261667 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
KPNA3-201ENST00000261667 CHUKO15111 745 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 LRRFIP1Q32MZ4 808 aaKnown RBP12.19□□□□□ -0.46
KPNA3-201ENST00000261667 IQCA1Q86XH1 822 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 CNNM3Q8NE01 707 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 KDM2BQ8NHM5 1336 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
KPNA3-201ENST00000261667 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
KPNA3-201ENST00000261667 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
KPNA3-201ENST00000261667 PIP4K2BP78356 416 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 CCDC38Q502W7 563 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.19□□□□□ -0.46
KPNA3-201ENST00000261667 PDE11AQ9HCR9 933 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 ADGRB1O14514 1584 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 LRRD1A4D1F6 860 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 IMMTQ16891 758 aaKnown RBP12.19□□□□□ -0.46
KPNA3-201ENST00000261667 SH2D4BQ5SQS7 431 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 ZSCAN25Q6NSZ9 544 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 GPR161Q8N6U8 529 aaKnown RBP12.19□□□□□ -0.46
KPNA3-201ENST00000261667 SPATA31D1Q6ZQQ2 1576 aa12.19□□□□□ -0.46
KPNA3-201ENST00000261667 ZSCAN22P10073 491 aaPredicted RBP12.18□□□□□ -0.46
KPNA3-201ENST00000261667 CLCN6P51797 869 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 CHMP4BP1P59074 171 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 KARSQ15046 597 aaKnown RBP12.18□□□□□ -0.46
KPNA3-201ENST00000261667 ARFGAP2Q8N6H7 521 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 ELP1O95163 1332 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 SEC62Q99442 399 aaKnown RBP12.18□□□□□ -0.46
KPNA3-201ENST00000261667 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 TRIM68Q6AZZ1 485 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 TSR2Q969E8 191 aaKnown RBP12.18□□□□□ -0.46
KPNA3-201ENST00000261667 SPDL1Q96EA4 605 aa12.18□□□□□ -0.46
KPNA3-201ENST00000261667 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
KPNA3-201ENST00000261667 ZNF75DP51815 510 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 ST7Q9NRC1 585 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 ADAM21Q9UKJ8 722 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 CTAGE9A4FU28 777 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 ATP8B1O43520 1251 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 NAIF1Q69YI7 327 aaPredicted RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 G3BP2Q9UN86 482 aaKnown RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 AOPEPQ8N6M6 819 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 UTP14AQ9BVJ6 771 aaKnown RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 USP16Q9Y5T5 823 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 A6NNZ2 444 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 CETN3O15182 167 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 ELF1P32519 619 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 PIP4K2AP48426 406 aaPredicted RBP12.17□□□□□ -0.46
KPNA3-201ENST00000261667 TUBB8Q3ZCM7 444 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
KPNA3-201ENST00000261667 ANKRD62A6NC57 917 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 RARSP54136 660 aaKnown RBP12.16□□□□□ -0.46
KPNA3-201ENST00000261667 ZC3H6P61129 1189 aaKnown RBP12.16□□□□□ -0.46
KPNA3-201ENST00000261667 ATP11AP98196 1134 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 NFXL1Q6ZNB6 911 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 UBASH3AP57075 661 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 MFSD4BQ5TF39 518 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 TSC22D3Q99576 134 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
KPNA3-201ENST00000261667 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 KDM5AP29375 1690 aaKnown RBP12.16□□□□□ -0.46
KPNA3-201ENST00000261667 TTC36A6NLP5 189 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 PIK3C2GO75747 1445 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
KPNA3-201ENST00000261667 GNGT1P63211 74 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 BRD3Q15059 726 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 NBPF20Q3BBV1 942 aa12.16□□□□□ -0.46
KPNA3-201ENST00000261667 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
KPNA3-201ENST00000261667 ENO4A6NNW6 628 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 DNA2P51530 1060 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 RWDD2BP57060 319 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 INF2Q27J81 1249 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 TEX11Q8IYF3 940 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 LZTFL1Q9NQ48 299 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 POLE2P56282 527 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms