RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 GCKRQ14397 625 aa5.55□□□□□ -1.52
USP44-201ENST00000258499 NECTIN1Q15223 517 aa5.55□□□□□ -1.52
USP44-201ENST00000258499 TNNI3KQ59H18 835 aa5.55□□□□□ -1.52
USP44-201ENST00000258499 CCDC94Q9BW85 323 aaPredicted RBP5.55□□□□□ -1.52
USP44-201ENST00000258499 ORC3Q9UBD5 711 aaPredicted RBP5.55□□□□□ -1.52
USP44-201ENST00000258499 FPGT-TNNI3KV9GXZ4 949 aa5.55□□□□□ -1.52
USP44-201ENST00000258499 SALL3Q9BXA9 1300 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 MAP2P11137 1827 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 A0A1B0GVL5 298 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 EPB41L2O43491 1005 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 DHX16O60231 1041 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 STX1AQ16623 288 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 MNS1Q8NEH6 495 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 DDX17Q92841 729 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 CHMP4CQ96CF2 233 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 ZNF594Q96JF6 807 aaPredicted RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 ZSCAN16Q9H4T2 348 aaPredicted RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 RPAP1Q9BWH6 1393 aaPredicted RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 MARCKSP29966 332 aaPredicted RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 IMMTQ16891 758 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 CEP135Q66GS9 1140 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 TMC6Q7Z403 805 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 IFNL2Q8IZJ0 200 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 CNNM1Q9NRU3 951 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 DBNLQ9UJU6 430 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 MRVI1Q9Y6F6 885 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 KLF18A0A0U1RQI7 1052 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 NEURL1BA8MQ27 555 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 PES1O00541 588 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 TAF5LO75529 589 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 HMGB1P09429 215 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 RXRAP19793 462 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 SFPQP23246 707 aaKnown RBP eCLIP5.54□□□□□ -1.52
USP44-201ENST00000258499 ZNF75DP51815 510 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 CFAP100Q494V2 611 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 DHX32Q7L7V1 743 aaKnown RBP5.54□□□□□ -1.52
USP44-201ENST00000258499 TMX1Q9H3N1 280 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 CLSTN2Q9H4D0 955 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 PAG1Q9NWQ8 432 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 OVOS2A0A0J9YW53 1432 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 OVOS2Q6IE36 1432 aa5.54□□□□□ -1.52
USP44-201ENST00000258499 GPTP24298 496 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 LMOD1P29536 600 aaPredicted RBP5.53□□□□□ -1.52
USP44-201ENST00000258499 EPHA10Q5JZY3 1008 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 MICU3Q86XE3 530 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 PRDM11Q9NQV5 511 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 CCDC69A6NI79 296 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 SLC3A2P08195 630 aaKnown RBP5.53□□□□□ -1.52
USP44-201ENST00000258499 CYP21A2P08686 494 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 TTLL5Q6EMB2 1281 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 OLFM4Q6UX06 510 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 TMEM87AQ8NBN3 555 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 KIAA1524Q8TCG1 905 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 GTF3C6Q969F1 213 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 USP28Q96RU2 1077 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 METTL22Q9BUU2 404 aaPredicted RBP5.53□□□□□ -1.52
USP44-201ENST00000258499 CTNNA3Q9UI47 895 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 SETD1BQ9UPS6 1966 aaKnown RBP5.53□□□□□ -1.52
USP44-201ENST00000258499 TSPOAP1O95153 1857 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 KDRP35968 1356 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 CTAGE5O15320 804 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 METTL24Q5JXM2 366 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 KIF18AQ8NI77 898 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 ZBTB9Q96C00 473 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 CWC25Q9NXE8 425 aaPredicted RBP5.53□□□□□ -1.52
USP44-201ENST00000258499 TMEM131LA2VDJ0 1609 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 ADCY9O60503 1353 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 USP31Q70CQ4 1352 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 PLEKHG1Q9ULL1 1385 aa5.53□□□□□ -1.52
USP44-201ENST00000258499 ERICH4A6NGS2 130 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 ZNF213O14771 459 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 IGKV5-2P06315 115 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 AKAP17AQ02040 695 aaKnown RBP5.52□□□□□ -1.53
USP44-201ENST00000258499 SCRN1Q12765 414 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 SAFBQ15424 915 aaKnown RBP eCLIP5.52□□□□□ -1.53
USP44-201ENST00000258499 ZSCAN25Q6NSZ9 544 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 RASSF8Q8NHQ8 419 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 MRPS27Q92552 414 aaKnown RBP5.52□□□□□ -1.53
USP44-201ENST00000258499 VIRMAQ69YN4 1812 aaKnown RBP5.52□□□□□ -1.53
USP44-201ENST00000258499 COL9A3Q14050 684 aaPredicted RBP5.52□□□□□ -1.53
USP44-201ENST00000258499 ARID5BQ14865 1188 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 NUP133Q8WUM0 1156 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 CDC42BPGQ6DT37 1551 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 A0A1B0GUL7 405 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 A1BGP04217 495 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 ATP5JP18859 108 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 TOB2Q14106 344 aaPredicted RBP5.52□□□□□ -1.53
USP44-201ENST00000258499 KBTBD3Q8NAB2 608 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 CACTINQ8WUQ7 758 aaKnown RBP5.52□□□□□ -1.53
USP44-201ENST00000258499 IFNKQ9P0W0 207 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 TBC1D2BQ9UPU7 963 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.52□□□□□ -1.53
USP44-201ENST00000258499 SIGLEC1Q9BZZ2 1709 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 IFT172Q9UG01 1749 aa5.52□□□□□ -1.53
USP44-201ENST00000258499 PRC1O43663 620 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 URI1O94763 535 aaPredicted RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 SNW1Q13573 536 aaKnown RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 NAA30Q147X3 362 aaPredicted RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 SLC52A2Q9HAB3 445 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 DLC1Q96QB1 1528 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms