RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 MPNDQ8N594 471 aa10.79□□□□□ -0.68
TMEM258-201ENST00000257262 PSMD1Q99460 953 aa10.79□□□□□ -0.68
TMEM258-201ENST00000257262 PLA2G12BQ9BX93 195 aa10.79□□□□□ -0.68
TMEM258-201ENST00000257262 C9orf78Q9NZ63 289 aaPredicted RBP10.79□□□□□ -0.68
TMEM258-201ENST00000257262 SPEF2Q9C093 1822 aa10.79□□□□□ -0.68
TMEM258-201ENST00000257262 LRRC37AA6NMS7 1700 aa10.78□□□□□ -0.68
TMEM258-201ENST00000257262 GRM8O00222 908 aa10.78□□□□□ -0.68
TMEM258-201ENST00000257262 CSF1RP07333 972 aa10.78□□□□□ -0.68
TMEM258-201ENST00000257262 IARSP41252 1262 aaKnown RBP10.78□□□□□ -0.68
TMEM258-201ENST00000257262 FOXO4P98177 505 aa10.78□□□□□ -0.68
TMEM258-201ENST00000257262 DPP8Q6V1X1 898 aaPredicted RBP10.78□□□□□ -0.68
TMEM258-201ENST00000257262 TMC4Q7Z404 712 aa10.78□□□□□ -0.68
TMEM258-201ENST00000257262 GREM2Q9H772 168 aa10.78□□□□□ -0.68
TMEM258-201ENST00000257262 GPBP1L1Q9HC44 474 aaPredicted RBP10.78□□□□□ -0.68
TMEM258-201ENST00000257262 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
TMEM258-201ENST00000257262 ANKRD18AQ8IVF6 992 aa10.77□□□□□ -0.69
TMEM258-201ENST00000257262 RTFDC1Q9BY42 306 aaPredicted RBP10.77□□□□□ -0.69
TMEM258-201ENST00000257262 API5Q9BZZ5 524 aaKnown RBP10.77□□□□□ -0.69
TMEM258-201ENST00000257262 NSFL1CQ9UNZ2 370 aaKnown RBP10.77□□□□□ -0.69
TMEM258-201ENST00000257262 ZC3H4Q9UPT8 1303 aaKnown RBP10.77□□□□□ -0.69
TMEM258-201ENST00000257262 GLTPD2A6NH11 291 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 ITGA6P23229 1130 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 GPSM2P81274 684 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 EPHA10Q5JZY3 1008 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 LMBR1LQ6UX01 489 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 SUPT20HQ8NEM7 779 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 ARHGAP45Q92619 1136 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 FRAT1Q92837 279 aaPredicted RBP10.76□□□□□ -0.69
TMEM258-201ENST00000257262 SUCLG2Q96I99 432 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 USP44Q9H0E7 712 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 UTYO14607 1347 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 KDM2BQ8NHM5 1336 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 RTL9Q8NET4 1388 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 COL4A5P29400 1685 aa10.76□□□□□ -0.69
TMEM258-201ENST00000257262 DUOX1Q9NRD9 1551 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 CCT4P50991 539 aaKnown RBP10.75□□□□□ -0.69
TMEM258-201ENST00000257262 AOC3Q16853 763 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 LARGE2Q8N3Y3 721 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 JDP2Q8WYK2 163 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 CDC5LQ99459 802 aaKnown RBP10.75□□□□□ -0.69
TMEM258-201ENST00000257262 VPS33BQ9H267 617 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 RRAGCQ9HB90 399 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 NMRK2Q9NPI5 230 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 TNNQ9UQP3 1299 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 KIF16BQ96L93 1317 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 LTBP1Q14766 1721 aa10.75□□□□□ -0.69
TMEM258-201ENST00000257262 ANKRD18BA2A2Z9 1011 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 C6orf229H3BNL8 230 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 FZD9O00144 591 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 KIF3CO14782 793 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 IPO8O15397 1037 aaKnown RBP10.74□□□□□ -0.69
TMEM258-201ENST00000257262 MAP3K13O43283 966 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 PPIP5K2O43314 1243 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 DDNO94850 711 aaPredicted RBP10.74□□□□□ -0.69
TMEM258-201ENST00000257262 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 DCAF8Q5TAQ9 597 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 BSDC1Q9NW68 430 aaPredicted RBP10.74□□□□□ -0.69
TMEM258-201ENST00000257262 PODXL2Q9NZ53 605 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 POLLQ9UGP5 575 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 MINPP1Q9UNW1 487 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 CHMP3Q9Y3E7 222 aa10.74□□□□□ -0.69
TMEM258-201ENST00000257262 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
TMEM258-201ENST00000257262 IGHMBP2P38935 993 aaKnown RBP10.73□□□□□ -0.69
TMEM258-201ENST00000257262 KIAA2012Q0VF49 1180 aa10.73□□□□□ -0.69
TMEM258-201ENST00000257262 IFIT5Q13325 482 aaKnown RBP10.73□□□□□ -0.69
TMEM258-201ENST00000257262 WASHC4Q2M389 1173 aa10.73□□□□□ -0.69
TMEM258-201ENST00000257262 ATF7IPQ6VMQ6 1270 aa10.73□□□□□ -0.69
TMEM258-201ENST00000257262 TBC1D16Q8TBP0 767 aa10.73□□□□□ -0.69
TMEM258-201ENST00000257262 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
TMEM258-201ENST00000257262 ANKIB1Q9P2G1 1089 aa10.73□□□□□ -0.69
TMEM258-201ENST00000257262 WDR90Q96KV7 1748 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 WTIPA6NIX2 430 aaPredicted RBP10.72□□□□□ -0.69
TMEM258-201ENST00000257262 POTECB2RU33 542 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 TRIM27P14373 513 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 GSE1Q14687 1217 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 CCDC57Q2TAC2 916 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 ZKSCAN2Q63HK3 967 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 INTS3Q68E01 1043 aaKnown RBP10.72□□□□□ -0.69
TMEM258-201ENST00000257262 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
TMEM258-201ENST00000257262 NIM1KQ8IY84 436 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 ZNF594Q96JF6 807 aaPredicted RBP10.72□□□□□ -0.69
TMEM258-201ENST00000257262 GPR101Q96P66 508 aaPredicted RBP10.72□□□□□ -0.69
TMEM258-201ENST00000257262 MPHOSPH8Q99549 860 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 BICC1Q9H694 974 aaKnown RBP10.72□□□□□ -0.69
TMEM258-201ENST00000257262 ZNF541Q9H0D2 1346 aa10.72□□□□□ -0.69
TMEM258-201ENST00000257262 XDHP47989 1333 aa10.71□□□□□ -0.69
TMEM258-201ENST00000257262 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
TMEM258-201ENST00000257262 RABL6Q3YEC7 729 aaPredicted RBP10.71□□□□□ -0.69
TMEM258-201ENST00000257262 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.69
TMEM258-201ENST00000257262 SPOCK2Q92563 424 aa10.71□□□□□ -0.69
TMEM258-201ENST00000257262 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
TMEM258-201ENST00000257262 EYA3Q99504 573 aa10.71□□□□□ -0.69
TMEM258-201ENST00000257262 ZC3H12CQ9C0D7 883 aaKnown RBP10.71□□□□□ -0.69
TMEM258-201ENST00000257262 GGA1Q9UJY5 639 aa10.71□□□□□ -0.69
TMEM258-201ENST00000257262 ZNRF3Q9ULT6 936 aa10.71□□□□□ -0.69
TMEM258-201ENST00000257262 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
TMEM258-201ENST00000257262 A0A1B0GUL6 1792 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 UFL1O94874 794 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms