RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 BSDC1Q9NW68 430 aaPredicted RBP29.09■■■□□ 2.25
LSM4-201ENST00000252816 C9orf78Q9NZ63 289 aaPredicted RBP29.09■■■□□ 2.25
LSM4-201ENST00000252816 UFL1O94874 794 aa29.08■■■□□ 2.25
LSM4-201ENST00000252816 SCNN1DP51172 638 aa29.08■■■□□ 2.25
LSM4-201ENST00000252816 GGA1Q9UJY5 639 aa29.08■■■□□ 2.25
LSM4-201ENST00000252816 EPHX2P34913 555 aa29.07■■■□□ 2.24
LSM4-201ENST00000252816 EYA3Q99504 573 aa29.07■■■□□ 2.24
LSM4-201ENST00000252816 DBNDD1Q9H9R9 158 aa29.07■■■□□ 2.24
LSM4-201ENST00000252816 MINPP1Q9UNW1 487 aa29.07■■■□□ 2.24
LSM4-201ENST00000252816 XDHP47989 1333 aa29.06■■■□□ 2.24
LSM4-201ENST00000252816 RAD17O75943 681 aa29.06■■■□□ 2.24
LSM4-201ENST00000252816 SPEF2Q9C093 1822 aa29.06■■■□□ 2.24
LSM4-201ENST00000252816 WTIPA6NIX2 430 aaPredicted RBP29.05■■■□□ 2.24
LSM4-201ENST00000252816 IGHMBP2P38935 993 aaKnown RBP29.05■■■□□ 2.24
LSM4-201ENST00000252816 CIAPIN1Q6FI81 312 aa29.05■■■□□ 2.24
LSM4-201ENST00000252816 NBPF7P0C2Y1 421 aaPredicted RBP29.04■■■□□ 2.24
LSM4-201ENST00000252816 APLP1P51693 650 aa29.04■■■□□ 2.24
LSM4-201ENST00000252816 DOK7Q18PE1 504 aa29.04■■■□□ 2.24
LSM4-201ENST00000252816 CHADLQ6NUI6 762 aa29.04■■■□□ 2.24
LSM4-201ENST00000252816 LMBR1LQ6UX01 489 aa29.04■■■□□ 2.24
LSM4-201ENST00000252816 UTYO14607 1347 aa29.03■■■□□ 2.24
LSM4-201ENST00000252816 EPS15P42566 896 aa29.03■■■□□ 2.24
LSM4-201ENST00000252816 RARSP54136 660 aaKnown RBP29.03■■■□□ 2.24
LSM4-201ENST00000252816 EAPPQ56P03 285 aaPredicted RBP29.03■■■□□ 2.24
LSM4-201ENST00000252816 LDHDQ86WU2 507 aa29.03■■■□□ 2.24
LSM4-201ENST00000252816 KAZALD1Q96I82 304 aa29.03■■■□□ 2.24
LSM4-201ENST00000252816 SUCLG2Q96I99 432 aa29.03■■■□□ 2.24
LSM4-201ENST00000252816 ZC3H12CQ9C0D7 883 aaKnown RBP29.03■■■□□ 2.24
LSM4-201ENST00000252816 ANKRD18BA2A2Z9 1011 aa29.02■■■□□ 2.24
LSM4-201ENST00000252816 ECE2O60344 883 aa29.02■■■□□ 2.24
LSM4-201ENST00000252816 ATP2B4P23634 1241 aa29.02■■■□□ 2.24
LSM4-201ENST00000252816 LMOD1P29536 600 aaPredicted RBP29.02■■■□□ 2.24
LSM4-201ENST00000252816 BRPF1P55201 1214 aaPredicted RBP29.02■■■□□ 2.24
LSM4-201ENST00000252816 CHMP3Q9Y3E7 222 aa29.02■■■□□ 2.24
LSM4-201ENST00000252816 GMPSP49915 693 aaPredicted RBP29.01■■■□□ 2.23
LSM4-201ENST00000252816 TNIP1Q15025 636 aa29.01■■■□□ 2.23
LSM4-201ENST00000252816 MPHOSPH8Q99549 860 aa29.01■■■□□ 2.23
LSM4-201ENST00000252816 KCNQ5Q9NR82 932 aa29.01■■■□□ 2.23
LSM4-201ENST00000252816 NOB1Q9ULX3 412 aaKnown RBP29.01■■■□□ 2.23
LSM4-201ENST00000252816 IFIT5Q13325 482 aaKnown RBP29■■■□□ 2.23
LSM4-201ENST00000252816 GPRC5DQ9NZD1 345 aa29■■■□□ 2.23
LSM4-201ENST00000252816 ADAMTSL1Q8N6G6 1762 aa28.99■■■□□ 2.23
LSM4-201ENST00000252816 HTRA3P83110 453 aa28.99■■■□□ 2.23
LSM4-201ENST00000252816 PNMA8AQ86V59 439 aaPredicted RBP28.99■■■□□ 2.23
LSM4-201ENST00000252816 PSMD14O00487 310 aa28.98■■■□□ 2.23
LSM4-201ENST00000252816 CCT4P50991 539 aaKnown RBP28.98■■■□□ 2.23
LSM4-201ENST00000252816 USP44Q9H0E7 712 aa28.97■■■□□ 2.23
LSM4-201ENST00000252816 CLEC11AQ9Y240 323 aa28.97■■■□□ 2.23
LSM4-201ENST00000252816 ZNF594Q96JF6 807 aaPredicted RBP28.96■■■□□ 2.23
LSM4-201ENST00000252816 ZBTB12Q9Y330 459 aaPredicted RBP28.96■■■□□ 2.23
LSM4-201ENST00000252816 CHRNDQ07001 517 aa28.95■■■□□ 2.22
LSM4-201ENST00000252816 CCDC57Q2TAC2 916 aa28.95■■■□□ 2.22
LSM4-201ENST00000252816 ANKRD2Q9GZV1 360 aa28.95■■■□□ 2.22
LSM4-201ENST00000252816 SCN9AQ15858 1988 aa28.95■■■□□ 2.22
LSM4-201ENST00000252816 MED23Q9ULK4 1368 aa28.94■■■□□ 2.22
LSM4-201ENST00000252816 G3V3G9 751 aa28.94■■■□□ 2.22
LSM4-201ENST00000252816 DCAF8Q5TAQ9 597 aa28.94■■■□□ 2.22
LSM4-201ENST00000252816 BICC1Q9H694 974 aaKnown RBP28.94■■■□□ 2.22
LSM4-201ENST00000252816 LEMD3Q9Y2U8 911 aa28.94■■■□□ 2.22
LSM4-201ENST00000252816 SHTN1A0MZ66 631 aa28.93■■■□□ 2.22
LSM4-201ENST00000252816 USP50Q70EL3 339 aaPredicted RBP28.93■■■□□ 2.22
LSM4-201ENST00000252816 DNAJC5GQ8N7S2 189 aa28.93■■■□□ 2.22
LSM4-201ENST00000252816 ANKRD44Q8N8A2 993 aa28.93■■■□□ 2.22
LSM4-201ENST00000252816 API5Q9BZZ5 524 aaKnown RBP28.93■■■□□ 2.22
LSM4-201ENST00000252816 ADARB2Q9NS39 739 aaKnown RBP28.93■■■□□ 2.22
LSM4-201ENST00000252816 ITGBL1O95965 494 aaPredicted RBP28.92■■■□□ 2.22
LSM4-201ENST00000252816 RABL6Q3YEC7 729 aaPredicted RBP28.92■■■□□ 2.22
LSM4-201ENST00000252816 MAP1SQ66K74 1059 aaPredicted RBP28.92■■■□□ 2.22
LSM4-201ENST00000252816 TXNRD3Q86VQ6 643 aa28.92■■■□□ 2.22
LSM4-201ENST00000252816 ZNF804BA4D1E1 1349 aa28.92■■■□□ 2.22
LSM4-201ENST00000252816 ZBED9Q6R2W3 1325 aa28.92■■■□□ 2.22
LSM4-201ENST00000252816 KLRK1P26718 216 aa28.91■■■□□ 2.22
LSM4-201ENST00000252816 TAF7LQ5H9L4 462 aa28.91■■■□□ 2.22
LSM4-201ENST00000252816 HELBQ8NG08 1087 aaPredicted RBP28.91■■■□□ 2.22
LSM4-201ENST00000252816 CNOT7Q9UIV1 285 aaKnown RBP28.91■■■□□ 2.22
LSM4-201ENST00000252816 PASKQ96RG2 1323 aa28.91■■■□□ 2.22
LSM4-201ENST00000252816 SNAP23O00161 211 aa28.9■■■□□ 2.22
LSM4-201ENST00000252816 TAF5LO75529 589 aa28.9■■■□□ 2.22
LSM4-201ENST00000252816 BCAR3O75815 825 aa28.9■■■□□ 2.22
LSM4-201ENST00000252816 VIL1P09327 827 aaKnown RBP28.9■■■□□ 2.22
LSM4-201ENST00000252816 LDHAL6AQ6ZMR3 332 aa28.9■■■□□ 2.22
LSM4-201ENST00000252816 DPF2Q92785 391 aa28.9■■■□□ 2.22
LSM4-201ENST00000252816 KIF16BQ96L93 1317 aa28.9■■■□□ 2.22
LSM4-201ENST00000252816 MICALL2Q8IY33 904 aa28.89■■■□□ 2.22
LSM4-201ENST00000252816 CNTROBQ8N137 903 aa28.89■■■□□ 2.22
LSM4-201ENST00000252816 ARHGAP45Q92619 1136 aa28.89■■■□□ 2.22
LSM4-201ENST00000252816 PODNQ7Z5L7 613 aa28.88■■■□□ 2.21
LSM4-201ENST00000252816 TRPM4Q8TD43 1214 aa28.88■■■□□ 2.21
LSM4-201ENST00000252816 CNNM1Q9NRU3 951 aa28.88■■■□□ 2.21
LSM4-201ENST00000252816 RPS12P25398 132 aaKnown RBP28.87■■■□□ 2.21
LSM4-201ENST00000252816 KCNJ4P48050 445 aa28.87■■■□□ 2.21
LSM4-201ENST00000252816 HIRAP54198 1017 aaPredicted RBP28.87■■■□□ 2.21
LSM4-201ENST00000252816 A0A1B0GUL6 1792 aa28.86■■■□□ 2.21
LSM4-201ENST00000252816 H7C1D1 291 aa28.86■■■□□ 2.21
LSM4-201ENST00000252816 PUS3Q9BZE2 481 aaKnown RBP28.86■■■□□ 2.21
LSM4-201ENST00000252816 IRS2Q9Y4H2 1338 aa28.86■■■□□ 2.21
LSM4-201ENST00000252816 COA1Q9GZY4 146 aa28.85■■■□□ 2.21
LSM4-201ENST00000252816 RSBN1LQ6PCB5 846 aaPredicted RBP28.84■■■□□ 2.21
LSM4-201ENST00000252816 SAMD7Q7Z3H4 446 aa28.84■■■□□ 2.21
LSM4-201ENST00000252816 TNNQ9UQP3 1299 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms