RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 GPR101Q96P66 508 aaPredicted RBP17.94■□□□□ 0.46
CNN1-201ENST00000252456 RRAGCQ9HB90 399 aa17.94■□□□□ 0.46
CNN1-201ENST00000252456 XDHP47989 1333 aa17.93■□□□□ 0.46
CNN1-201ENST00000252456 SCN4AP35499 1836 aa17.93■□□□□ 0.46
CNN1-201ENST00000252456 ANKRD18BA2A2Z9 1011 aa17.93■□□□□ 0.46
CNN1-201ENST00000252456 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
CNN1-201ENST00000252456 IGHMBP2P38935 993 aaKnown RBP17.93■□□□□ 0.46
CNN1-201ENST00000252456 IFIT5Q13325 482 aaKnown RBP17.93■□□□□ 0.46
CNN1-201ENST00000252456 CHMP3Q9Y3E7 222 aa17.93■□□□□ 0.46
CNN1-201ENST00000252456 SCN9AQ15858 1988 aa17.93■□□□□ 0.46
CNN1-201ENST00000252456 NIM1KQ8IY84 436 aa17.92■□□□□ 0.46
CNN1-201ENST00000252456 ZNF594Q96JF6 807 aaPredicted RBP17.92■□□□□ 0.46
CNN1-201ENST00000252456 ANKIB1Q9P2G1 1089 aa17.92■□□□□ 0.46
CNN1-201ENST00000252456 C6orf229H3BNL8 230 aa17.91■□□□□ 0.46
CNN1-201ENST00000252456 UFL1O94874 794 aa17.91■□□□□ 0.46
CNN1-201ENST00000252456 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
CNN1-201ENST00000252456 ZKSCAN2Q63HK3 967 aa17.91■□□□□ 0.46
CNN1-201ENST00000252456 CLUAP1Q96AJ1 413 aa17.91■□□□□ 0.46
CNN1-201ENST00000252456 L3MBTL3Q96JM7 780 aaPredicted RBP17.91■□□□□ 0.46
CNN1-201ENST00000252456 MEIS3Q99687 375 aa17.91■□□□□ 0.46
CNN1-201ENST00000252456 GGA1Q9UJY5 639 aa17.91■□□□□ 0.46
CNN1-201ENST00000252456 YDJCA8MPS7 323 aa17.9■□□□□ 0.46
CNN1-201ENST00000252456 MPHOSPH8Q99549 860 aa17.9■□□□□ 0.46
CNN1-201ENST00000252456 ZNRF3Q9ULT6 936 aa17.9■□□□□ 0.46
CNN1-201ENST00000252456 PSME4Q14997 1843 aa17.9■□□□□ 0.46
CNN1-201ENST00000252456 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
CNN1-201ENST00000252456 CCDC57Q2TAC2 916 aa17.9■□□□□ 0.46
CNN1-201ENST00000252456 GPC2Q8N158 579 aa17.9■□□□□ 0.46
CNN1-201ENST00000252456 ZNF646O15015 1829 aaPredicted RBP17.89■□□□□ 0.45
CNN1-201ENST00000252456 UBTFL1P0CB47 393 aaPredicted RBP17.89■□□□□ 0.45
CNN1-201ENST00000252456 VEGFAP15692 232 aaPredicted RBP17.89■□□□□ 0.45
CNN1-201ENST00000252456 CHRNDQ07001 517 aa17.89■□□□□ 0.45
CNN1-201ENST00000252456 CXCL9Q07325 125 aa17.89■□□□□ 0.45
CNN1-201ENST00000252456 RLBP1P12271 317 aa17.88■□□□□ 0.45
CNN1-201ENST00000252456 ATP2B4P23634 1241 aa17.88■□□□□ 0.45
CNN1-201ENST00000252456 EIF6P56537 245 aaKnown RBP17.88■□□□□ 0.45
CNN1-201ENST00000252456 C1QTNF8P60827 252 aa17.88■□□□□ 0.45
CNN1-201ENST00000252456 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
CNN1-201ENST00000252456 EYA3Q99504 573 aa17.88■□□□□ 0.45
CNN1-201ENST00000252456 DBNDD1Q9H9R9 158 aa17.88■□□□□ 0.45
CNN1-201ENST00000252456 MED23Q9ULK4 1368 aa17.88■□□□□ 0.45
CNN1-201ENST00000252456 LRRFIP2Q9Y608 721 aaKnown RBP17.87■□□□□ 0.45
CNN1-201ENST00000252456 ADAMTSL1Q8N6G6 1762 aa17.87■□□□□ 0.45
CNN1-201ENST00000252456 TOMM70O94826 608 aa17.87■□□□□ 0.45
CNN1-201ENST00000252456 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
CNN1-201ENST00000252456 DOK7Q18PE1 504 aa17.87■□□□□ 0.45
CNN1-201ENST00000252456 LDHAL6AQ6ZMR3 332 aa17.87■□□□□ 0.45
CNN1-201ENST00000252456 PUS3Q9BZE2 481 aaKnown RBP17.87■□□□□ 0.45
CNN1-201ENST00000252456 ZC3H12CQ9C0D7 883 aaKnown RBP17.87■□□□□ 0.45
CNN1-201ENST00000252456 IRS2Q9Y4H2 1338 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 SNAP23O00161 211 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 ECE2O60344 883 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 KLRK1P26718 216 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 SCNN1DP51172 638 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 TXNRD3Q86VQ6 643 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 HELBQ8NG08 1087 aaPredicted RBP17.86■□□□□ 0.45
CNN1-201ENST00000252456 ANKRD2Q9GZV1 360 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 KCNQ5Q9NR82 932 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 LEMD3Q9Y2U8 911 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 GJA3Q9Y6H8 435 aa17.86■□□□□ 0.45
CNN1-201ENST00000252456 TAF5LO75529 589 aa17.85■□□□□ 0.45
CNN1-201ENST00000252456 RAD17O75943 681 aa17.85■□□□□ 0.45
CNN1-201ENST00000252456 TAF7LQ5H9L4 462 aa17.85■□□□□ 0.45
CNN1-201ENST00000252456 KLHDC4Q8TBB5 520 aa17.85■□□□□ 0.45
CNN1-201ENST00000252456 RCAN3Q9UKA8 241 aa17.85■□□□□ 0.45
CNN1-201ENST00000252456 RIPOR2Q9Y4F9 1068 aa17.85■□□□□ 0.45
CNN1-201ENST00000252456 ZNF804BA4D1E1 1349 aa17.85■□□□□ 0.45
CNN1-201ENST00000252456 CIAPIN1Q6FI81 312 aa17.84■□□□□ 0.45
CNN1-201ENST00000252456 DZIP1LQ8IYY4 767 aaKnown RBP17.84■□□□□ 0.45
CNN1-201ENST00000252456 CNNM1Q9NRU3 951 aa17.84■□□□□ 0.45
CNN1-201ENST00000252456 GNAI3P08754 354 aa17.83■□□□□ 0.45
CNN1-201ENST00000252456 LRRC24Q50LG9 513 aa17.83■□□□□ 0.45
CNN1-201ENST00000252456 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.45
CNN1-201ENST00000252456 TAF1DQ9H5J8 278 aaPredicted RBP17.83■□□□□ 0.45
CNN1-201ENST00000252456 CEP350Q5VT06 3117 aa17.83■□□□□ 0.44
CNN1-201ENST00000252456 IQCA1LA6NCM1 817 aa17.83■□□□□ 0.44
CNN1-201ENST00000252456 POTEIP0CG38 1075 aa17.83■□□□□ 0.44
CNN1-201ENST00000252456 POTEJP0CG39 1038 aa17.83■□□□□ 0.44
CNN1-201ENST00000252456 PTPN12Q05209 780 aaKnown RBP17.83■□□□□ 0.44
CNN1-201ENST00000252456 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
CNN1-201ENST00000252456 HACL1Q9UJ83 578 aa17.83■□□□□ 0.44
CNN1-201ENST00000252456 PSMD14O00487 310 aa17.82■□□□□ 0.44
CNN1-201ENST00000252456 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
CNN1-201ENST00000252456 PANK1Q8TE04 598 aa17.82■□□□□ 0.44
CNN1-201ENST00000252456 GMPSP49915 693 aaPredicted RBP17.81■□□□□ 0.44
CNN1-201ENST00000252456 MTX1Q13505 466 aa17.81■□□□□ 0.44
CNN1-201ENST00000252456 C15orf52Q6ZUT6 534 aaKnown RBP17.81■□□□□ 0.44
CNN1-201ENST00000252456 C16orf71Q8IYS4 520 aaPredicted RBP17.81■□□□□ 0.44
CNN1-201ENST00000252456 VGLL2Q8N8G2 317 aa17.81■□□□□ 0.44
CNN1-201ENST00000252456 EPHX2P34913 555 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 EPS15P42566 896 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 TNIP1Q15025 636 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 HDAC5Q9UQL6 1122 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 ZNF609O15014 1411 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 MROH5Q6ZUA9 1318 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 PLIN1O60240 522 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
CNN1-201ENST00000252456 PODNQ7Z5L7 613 aa17.8■□□□□ 0.44
CNN1-201ENST00000252456 ZBTB12Q9Y330 459 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms