RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CSF1RP07333 972 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 PDE4CQ08493 712 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 FKBP5Q13451 457 aaPredicted RBP4.92□□□□□ -1.62
UBE4A-201ENST00000252108 PLEKHO1Q53GL0 409 aaPredicted RBP4.92□□□□□ -1.62
UBE4A-201ENST00000252108 VPS53Q5VIR6 699 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 ILDR1Q86SU0 546 aaPredicted RBP4.92□□□□□ -1.62
UBE4A-201ENST00000252108 CCDC94Q9BW85 323 aaPredicted RBP4.92□□□□□ -1.62
UBE4A-201ENST00000252108 TSPYL1Q9H0U9 437 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 ATG3Q9NT62 314 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 IRS2Q9Y4H2 1338 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 ATP5JP18859 108 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 EXOSC10Q01780 885 aaKnown RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 TEX35Q5T0J7 233 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 ZNF530Q6P9A1 599 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 DCAF5Q96JK2 942 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 FEZ1Q99689 392 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 NBPF3Q9H094 633 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 NAT10Q9H0A0 1025 aaKnown RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 ARGLU1Q9NWB6 273 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 USP16Q9Y5T5 823 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 A0A0D9SFI3 127 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 TAF5LO75529 589 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 KRT85P78386 507 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 LRRFIP1Q32MZ4 808 aaKnown RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 STOX1Q6ZVD7 989 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 RILPL2Q969X0 211 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 KIF20AO95235 890 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 UBTFL1P0CB47 393 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 ZNF589Q86UQ0 364 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 RBM33Q96EV2 1170 aaKnown RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 CGNQ9P2M7 1197 aaKnown RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 DUOX1Q9NRD9 1551 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 ANXA1P04083 346 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 AK2P54819 239 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 PAXBP1Q9Y5B6 917 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 RTL9Q8NET4 1388 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 KDM4FA0A1W2PPD8 638 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 CTAGE5O15320 804 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 CTDNEP1O95476 244 aa4.91□□□□□ -1.62
UBE4A-201ENST00000252108 ZNF512BQ96KM6 892 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 COL1A1P02452 1464 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-201ENST00000252108 CHGBP05060 677 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 ESCO1Q5FWF5 840 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 UTP14CQ5TAP6 766 aaKnown RBP4.9□□□□□ -1.62
UBE4A-201ENST00000252108 MYRIPQ8NFW9 859 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 SCAND2PQ9GZW5 306 aaPredicted RBP4.9□□□□□ -1.62
UBE4A-201ENST00000252108 DDX19AQ9NUU7 478 aaKnown RBP4.9□□□□□ -1.62
UBE4A-201ENST00000252108 SYCE3A1L190 88 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 GPS2Q13227 327 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 HAUS7Q99871 368 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 ECHDC1Q9NTX5 307 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 TPCN1Q9ULQ1 816 aa4.9□□□□□ -1.62
UBE4A-201ENST00000252108 GADD45BO75293 160 aaPredicted RBP4.9□□□□□ -1.63
UBE4A-201ENST00000252108 TPM1P09493 284 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 PRIM1P49642 420 aaKnown RBP4.9□□□□□ -1.63
UBE4A-201ENST00000252108 FGD1P98174 961 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 KRT32Q14532 448 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 SLC4A10Q6U841 1118 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 NUTM1Q86Y26 1132 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 PA2G4Q9UQ80 394 aaKnown RBP4.9□□□□□ -1.63
UBE4A-201ENST00000252108 ERVV-2B6SEH9 535 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 SRGAP3O43295 1099 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 GLRX3O76003 335 aaKnown RBP4.9□□□□□ -1.63
UBE4A-201ENST00000252108 CIAO1O76071 339 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 ME3Q16798 604 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 SIPA1L1O43166 1804 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 BECN2A8MW95 431 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 PIP4K2BP78356 416 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.9□□□□□ -1.63
UBE4A-201ENST00000252108 PIBF1Q8WXW3 757 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 CYP46A1Q9Y6A2 500 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 CDHR2Q9BYE9 1310 aa4.9□□□□□ -1.63
UBE4A-201ENST00000252108 SYCP1Q15431 976 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 CARD10Q9BWT7 1032 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 LIMCH1Q9UPQ0 1083 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 ZNF330Q9Y3S2 320 aaPredicted RBP4.89□□□□□ -1.63
UBE4A-201ENST00000252108 RGPD3A6NKT7 1758 aaPredicted RBP4.89□□□□□ -1.63
UBE4A-201ENST00000252108 RGPD4Q7Z3J3 1758 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 APBB1O00213 710 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 SLC27A2O14975 620 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 MAP3K11Q16584 847 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 ZNF771Q7L3S4 317 aaPredicted RBP4.89□□□□□ -1.63
UBE4A-201ENST00000252108 CCDC112Q8NEF3 446 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 EVI5LQ96CN4 794 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 FAM227BQ96M60 508 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 IL1RAPL2Q9NP60 686 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 TACC3Q9Y6A5 838 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 SYT1P21579 422 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 PLBD2Q8NHP8 589 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 ZMYM6O95789 1325 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 NOLC1Q14978 699 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBE4A-201ENST00000252108 CCDC73Q6ZRK6 1079 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 CLASRPQ8N2M8 674 aaKnown RBP4.89□□□□□ -1.63
UBE4A-201ENST00000252108 DDX17Q92841 729 aaKnown RBP4.89□□□□□ -1.63
UBE4A-201ENST00000252108 NUP62CLQ9H1M0 184 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 CFAP45Q9UL16 551 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 TNNI3KQ59H18 835 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 FPGT-TNNI3KV9GXZ4 949 aa4.89□□□□□ -1.63
UBE4A-201ENST00000252108 ANKRD31Q8N7Z5 1873 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 DDX58O95786 925 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms