RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PDE4AP27815 886 aa15.91■□□□□ 0.14
LSM8-201ENST00000249299 RPS8P62241 208 aaKnown RBP15.91■□□□□ 0.14
LSM8-201ENST00000249299 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
LSM8-201ENST00000249299 RBM17Q96I25 401 aaKnown RBP15.91■□□□□ 0.14
LSM8-201ENST00000249299 SIL1Q9H173 461 aa15.91■□□□□ 0.14
LSM8-201ENST00000249299 CNNM1Q9NRU3 951 aa15.91■□□□□ 0.14
LSM8-201ENST00000249299 LRP5O75197 1615 aa15.9■□□□□ 0.14
LSM8-201ENST00000249299 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
LSM8-201ENST00000249299 SALL3Q9BXA9 1300 aa15.9■□□□□ 0.14
LSM8-201ENST00000249299 BBOX1O75936 387 aa15.9■□□□□ 0.14
LSM8-201ENST00000249299 GRAPQ13588 217 aa15.9■□□□□ 0.14
LSM8-201ENST00000249299 PLEKHM2Q8IWE5 1019 aa15.9■□□□□ 0.14
LSM8-201ENST00000249299 GRAPLQ8TC17 118 aaPredicted RBP15.9■□□□□ 0.14
LSM8-201ENST00000249299 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
LSM8-201ENST00000249299 GPATCH3Q96I76 525 aa15.9■□□□□ 0.14
LSM8-201ENST00000249299 IFIT2P09913 472 aaKnown RBP15.89■□□□□ 0.13
LSM8-201ENST00000249299 NPR1P16066 1061 aa15.89■□□□□ 0.13
LSM8-201ENST00000249299 LRRC24Q50LG9 513 aa15.89■□□□□ 0.13
LSM8-201ENST00000249299 TNNI3KQ59H18 835 aa15.89■□□□□ 0.13
LSM8-201ENST00000249299 C3orf67Q6ZVT6 689 aa15.89■□□□□ 0.13
LSM8-201ENST00000249299 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.13
LSM8-201ENST00000249299 CCDC85AQ96PX6 553 aaPredicted RBP15.89■□□□□ 0.13
LSM8-201ENST00000249299 SEC31BQ9NQW1 1179 aa15.89■□□□□ 0.13
LSM8-201ENST00000249299 FPGT-TNNI3KV9GXZ4 949 aa15.89■□□□□ 0.13
LSM8-201ENST00000249299 APBB1O00213 710 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
LSM8-201ENST00000249299 PDE8BO95263 885 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 MX1P20591 662 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 POLD1P28340 1107 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 ALDH1B1P30837 517 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 VASPP50552 380 aaPredicted RBP15.88■□□□□ 0.13
LSM8-201ENST00000249299 PDE1AP54750 535 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 TFCP2Q12800 502 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 VGLL2Q8N8G2 317 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 IL1RAPL2Q9NP60 686 aa15.88■□□□□ 0.13
LSM8-201ENST00000249299 ERC2O15083 957 aa15.87■□□□□ 0.13
LSM8-201ENST00000249299 SRGNP10124 158 aa15.87■□□□□ 0.13
LSM8-201ENST00000249299 RGS3P49796 1198 aa15.87■□□□□ 0.13
LSM8-201ENST00000249299 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
LSM8-201ENST00000249299 BMP2KLQ5H9B9 411 aa15.87■□□□□ 0.13
LSM8-201ENST00000249299 METTL24Q5JXM2 366 aa15.87■□□□□ 0.13
LSM8-201ENST00000249299 ILDR2Q71H61 639 aa15.87■□□□□ 0.13
LSM8-201ENST00000249299 EAF2Q96CJ1 260 aaPredicted RBP15.87■□□□□ 0.13
LSM8-201ENST00000249299 PUS3Q9BZE2 481 aaKnown RBP15.87■□□□□ 0.13
LSM8-201ENST00000249299 ANKRD2Q9GZV1 360 aa15.87■□□□□ 0.13
LSM8-201ENST00000249299 R3HDM1Q15032 1099 aaKnown RBP15.86■□□□□ 0.13
LSM8-201ENST00000249299 STYK1Q6J9G0 422 aa15.86■□□□□ 0.13
LSM8-201ENST00000249299 AACSQ86V21 672 aa15.86■□□□□ 0.13
LSM8-201ENST00000249299 MASTLQ96GX5 879 aa15.86■□□□□ 0.13
LSM8-201ENST00000249299 C10orf71Q711Q0 1435 aa15.85■□□□□ 0.13
LSM8-201ENST00000249299 GLRX3O76003 335 aaKnown RBP15.85■□□□□ 0.13
LSM8-201ENST00000249299 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
LSM8-201ENST00000249299 PUM3Q15397 648 aaKnown RBP15.85■□□□□ 0.13
LSM8-201ENST00000249299 TICAM2Q86XR7 235 aa15.85■□□□□ 0.13
LSM8-201ENST00000249299 C16orf71Q8IYS4 520 aaPredicted RBP15.85■□□□□ 0.13
LSM8-201ENST00000249299 LPIN2Q92539 896 aa15.85■□□□□ 0.13
LSM8-201ENST00000249299 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
LSM8-201ENST00000249299 PDGFDQ9GZP0 370 aaPredicted RBP15.85■□□□□ 0.13
LSM8-201ENST00000249299 ECHDC1Q9NTX5 307 aa15.85■□□□□ 0.13
LSM8-201ENST00000249299 H0YIN7 160 aa15.84■□□□□ 0.13
LSM8-201ENST00000249299 FGFR2P21802 821 aa15.84■□□□□ 0.13
LSM8-201ENST00000249299 CCDC24Q8N4L8 307 aa15.84■□□□□ 0.13
LSM8-201ENST00000249299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.84■□□□□ 0.13
LSM8-201ENST00000249299 ZNF512BQ96KM6 892 aaPredicted RBP15.84■□□□□ 0.13
LSM8-201ENST00000249299 CREBZFQ9NS37 354 aa15.84■□□□□ 0.13
LSM8-201ENST00000249299 MINPP1Q9UNW1 487 aa15.84■□□□□ 0.13
LSM8-201ENST00000249299 CASZ1Q86V15 1759 aa15.84■□□□□ 0.13
LSM8-201ENST00000249299 A0A1B0GUL7 405 aa15.83■□□□□ 0.12
LSM8-201ENST00000249299 EIF5BO60841 1220 aaKnown RBP15.83■□□□□ 0.12
LSM8-201ENST00000249299 TTC22Q5TAA0 569 aa15.83■□□□□ 0.12
LSM8-201ENST00000249299 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
LSM8-201ENST00000249299 ZNF609O15014 1411 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 IFIT1P09914 478 aaKnown RBP15.82■□□□□ 0.12
LSM8-201ENST00000249299 ATP5JP18859 108 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 TGFB2P61812 414 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 CHRNDQ07001 517 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 ATP2B3Q16720 1220 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 SP8Q8IXZ3 490 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 OTUD7AQ8TE49 926 aaPredicted RBP15.82■□□□□ 0.12
LSM8-201ENST00000249299 CNKSR1Q969H4 720 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 SGIP1Q9BQI5 828 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 DBNLQ9UJU6 430 aaKnown RBP15.82■□□□□ 0.12
LSM8-201ENST00000249299 LEMD3Q9Y2U8 911 aa15.82■□□□□ 0.12
LSM8-201ENST00000249299 TNRC6CQ9HCJ0 1690 aaKnown RBP15.81■□□□□ 0.12
LSM8-201ENST00000249299 SLC5A1P13866 664 aa15.81■□□□□ 0.12
LSM8-201ENST00000249299 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
LSM8-201ENST00000249299 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
LSM8-201ENST00000249299 PI4K2BQ8TCG2 481 aa15.81■□□□□ 0.12
LSM8-201ENST00000249299 PODXL2Q9NZ53 605 aa15.81■□□□□ 0.12
LSM8-201ENST00000249299 ZBTB7AO95365 584 aa15.8■□□□□ 0.12
LSM8-201ENST00000249299 CCDC158Q5M9N0 1113 aa15.8■□□□□ 0.12
LSM8-201ENST00000249299 C15orf52Q6ZUT6 534 aaKnown RBP15.8■□□□□ 0.12
LSM8-201ENST00000249299 CCDC8Q9H0W5 538 aaPredicted RBP15.8■□□□□ 0.12
LSM8-201ENST00000249299 TMX4Q9H1E5 349 aaPredicted RBP15.8■□□□□ 0.12
LSM8-201ENST00000249299 ATP6V0A2Q9Y487 856 aa15.8■□□□□ 0.12
LSM8-201ENST00000249299 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
LSM8-201ENST00000249299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.8■□□□□ 0.12
LSM8-201ENST00000249299 XDHP47989 1333 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms