RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 SLC51AQ86UW1 340 aa12.62□□□□□ -0.39
HMGCL-201ENST00000235958 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-201ENST00000235958 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-201ENST00000235958 RWDD1Q9H446 243 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-201ENST00000235958 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
HMGCL-201ENST00000235958 NSFL1CQ9UNZ2 370 aaKnown RBP12.62□□□□□ -0.39
HMGCL-201ENST00000235958 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
HMGCL-201ENST00000235958 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
HMGCL-201ENST00000235958 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
HMGCL-201ENST00000235958 WTIPA6NIX2 430 aaPredicted RBP12.61□□□□□ -0.39
HMGCL-201ENST00000235958 CIAO1O76071 339 aa12.61□□□□□ -0.39
HMGCL-201ENST00000235958 IL15P40933 162 aaPredicted RBP12.61□□□□□ -0.39
HMGCL-201ENST00000235958 CHRNDQ07001 517 aa12.61□□□□□ -0.39
HMGCL-201ENST00000235958 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
HMGCL-201ENST00000235958 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
HMGCL-201ENST00000235958 DCTPP1Q9H773 170 aa12.61□□□□□ -0.39
HMGCL-201ENST00000235958 TAF5LO75529 589 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 SASH1O94885 1247 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 YBX3P16989 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
HMGCL-201ENST00000235958 GPSM2P81274 684 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 GPR162Q16538 588 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 HSP90AB4PQ58FF6 505 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 MPNDQ8N594 471 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 ANKRD2Q9GZV1 360 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 ANKIB1Q9P2G1 1089 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 CEP126Q9P2H0 1117 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
HMGCL-201ENST00000235958 SNAP23O00161 211 aa12.59□□□□□ -0.39
HMGCL-201ENST00000235958 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-201ENST00000235958 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
HMGCL-201ENST00000235958 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
HMGCL-201ENST00000235958 ARHGAP27Q6ZUM4 889 aa12.59□□□□□ -0.39
HMGCL-201ENST00000235958 PODXL2Q9NZ53 605 aa12.59□□□□□ -0.39
HMGCL-201ENST00000235958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-201ENST00000235958 SPEF2Q9C093 1822 aa12.59□□□□□ -0.39
HMGCL-201ENST00000235958 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
HMGCL-201ENST00000235958 APBB1O00213 710 aa12.58□□□□□ -0.4
HMGCL-201ENST00000235958 RAB11FIP3O75154 756 aa12.58□□□□□ -0.4
HMGCL-201ENST00000235958 PDE8BO95263 885 aa12.58□□□□□ -0.4
HMGCL-201ENST00000235958 TFCP2Q12800 502 aa12.58□□□□□ -0.4
HMGCL-201ENST00000235958 CCDC93Q567U6 631 aa12.58□□□□□ -0.4
HMGCL-201ENST00000235958 DPP8Q6V1X1 898 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-201ENST00000235958 POLLQ9UGP5 575 aa12.58□□□□□ -0.4
HMGCL-201ENST00000235958 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
HMGCL-201ENST00000235958 ATP2B4P23634 1241 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 TIMM10P62072 90 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 VGLL2Q8N8G2 317 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 TBC1D16Q8TBP0 767 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 GGA1Q9UJY5 639 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 LEMD3Q9Y2U8 911 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 XDHP47989 1333 aa12.57□□□□□ -0.4
HMGCL-201ENST00000235958 UBE4AQ14139 1066 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 ERC1Q8IUD2 1116 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 RTFDC1Q9BY42 306 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-201ENST00000235958 BCL11AQ9H165 835 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 ZNF804BA4D1E1 1349 aa12.56□□□□□ -0.4
HMGCL-201ENST00000235958 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 NFKBIEO00221 500 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 SMARCA5O60264 1052 aaPredicted RBP12.55□□□□□ -0.4
HMGCL-201ENST00000235958 GRIN3BO60391 1043 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 UFL1O94874 794 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 FGFR2P21802 821 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 KCNJ4P48050 445 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
HMGCL-201ENST00000235958 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 GPR101Q96P66 508 aaPredicted RBP12.55□□□□□ -0.4
HMGCL-201ENST00000235958 PSMD1Q99460 953 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 LRRCC1Q9C099 1032 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 IL1RAPL2Q9NP60 686 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 AKAP2Q9Y2D5 859 aa12.55□□□□□ -0.4
HMGCL-201ENST00000235958 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 PUM3Q15397 648 aaKnown RBP12.54□□□□□ -0.4
HMGCL-201ENST00000235958 ATP2B3Q16720 1220 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 LPIN2Q92539 896 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 EAF2Q96CJ1 260 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-201ENST00000235958 NEUROD6Q96NK8 337 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
HMGCL-201ENST00000235958 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
HMGCL-201ENST00000235958 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
HMGCL-201ENST00000235958 A0A1B0GUL7 405 aa12.53□□□□□ -0.4
HMGCL-201ENST00000235958 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
HMGCL-201ENST00000235958 CLASRPQ8N2M8 674 aaKnown RBP12.53□□□□□ -0.4
HMGCL-201ENST00000235958 EYA3Q99504 573 aa12.53□□□□□ -0.4
HMGCL-201ENST00000235958 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
HMGCL-201ENST00000235958 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
HMGCL-201ENST00000235958 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms