RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 MIS18AQ9NYP9 233 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 FAM193AP78312 1265 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 TEX35Q5T0J7 233 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 CREBRFQ8IUR6 639 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 SPATA32Q96LK8 384 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 SLIT2O94813 1529 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 SCN11AQ9UI33 1791 aa18.52■□□□□ 0.56
DDX1-201ENST00000233084 PTPRCP08575 1304 aa18.52■□□□□ 0.55
DDX1-201ENST00000233084 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.55
DDX1-201ENST00000233084 IL17RAQ96F46 866 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 RASSF4Q9H2L5 321 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 GYS2P54840 703 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 ADCK5Q3MIX3 580 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
DDX1-201ENST00000233084 PDRG1Q9NUG6 133 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 LCMT1Q9UIC8 334 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
DDX1-201ENST00000233084 SIPA1L3O60292 1781 aaPredicted RBP18.51■□□□□ 0.55
DDX1-201ENST00000233084 CCZ1BP86790 482 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 CCZ1P86791 482 aaPredicted RBP18.51■□□□□ 0.55
DDX1-201ENST00000233084 SMARCE1Q969G3 411 aa18.51■□□□□ 0.55
DDX1-201ENST00000233084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.558e-8■■■□□ 14.6
DDX1-201ENST00000233084 SNW1Q13573 536 aaKnown RBP18.5■□□□□ 0.55
DDX1-201ENST00000233084 CLSTN2Q9H4D0 955 aa18.5■□□□□ 0.55
DDX1-201ENST00000233084 CHL1O00533 1208 aa18.5■□□□□ 0.55
DDX1-201ENST00000233084 SGSM2O43147 1006 aa18.5■□□□□ 0.55
DDX1-201ENST00000233084 SEC31AO94979 1220 aaKnown RBP18.5■□□□□ 0.55
DDX1-201ENST00000233084 ST3GAL1Q11201 340 aa18.5■□□□□ 0.55
DDX1-201ENST00000233084 ME3Q16798 604 aa18.5■□□□□ 0.55
DDX1-201ENST00000233084 RGS22Q8NE09 1264 aa18.5■□□□□ 0.55
DDX1-201ENST00000233084 LGR6Q9HBX8 967 aa18.5■□□□□ 0.55
DDX1-201ENST00000233084 SPATA31A6Q5VVP1 1343 aa18.49■□□□□ 0.55
DDX1-201ENST00000233084 C11orf57Q6ZUT1 292 aaPredicted RBP18.49■□□□□ 0.55
DDX1-201ENST00000233084 KLHL34Q8N239 644 aa18.49■□□□□ 0.55
DDX1-201ENST00000233084 LSG1Q9H089 658 aaKnown RBP18.49■□□□□ 0.55
DDX1-201ENST00000233084 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
DDX1-201ENST00000233084 RNF20Q5VTR2 975 aa18.49■□□□□ 0.55
DDX1-201ENST00000233084 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
DDX1-201ENST00000233084 DDX19AQ9NUU7 478 aaKnown RBP18.49■□□□□ 0.55
DDX1-201ENST00000233084 TMCO3Q6UWJ1 677 aa18.48■□□□□ 0.55
DDX1-201ENST00000233084 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
DDX1-201ENST00000233084 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 BECN2A8MW95 431 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 NEMFO60524 1076 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 IL2RBP14784 551 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
DDX1-201ENST00000233084 TXLNBQ8N3L3 684 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 STAP2Q9UGK3 403 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 MYO1CO00159 1063 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 CYP27B1O15528 508 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 PHKG2P15735 406 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 CDC25BP30305 580 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 TPM4P67936 248 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 DISP2A7MBM2 1401 aa18.47■□□□□ 0.55
DDX1-201ENST00000233084 KDM6AO15550 1401 aaPredicted RBP18.47■□□□□ 0.55
DDX1-201ENST00000233084 ZSCAN26Q16670 478 aa18.46■□□□□ 0.55
DDX1-201ENST00000233084 LEO1Q8WVC0 666 aaPredicted RBP18.46■□□□□ 0.55
DDX1-201ENST00000233084 CCDC34Q96HJ3 373 aa18.46■□□□□ 0.55
DDX1-201ENST00000233084 TCEANC2Q96MN5 208 aa18.46■□□□□ 0.55
DDX1-201ENST00000233084 EPC1Q9H2F5 836 aa18.46■□□□□ 0.55
DDX1-201ENST00000233084 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
DDX1-201ENST00000233084 CEBPZQ03701 1054 aaKnown RBP18.45■□□□□ 0.54
DDX1-201ENST00000233084 IQCB1Q15051 598 aa18.45■□□□□ 0.54
DDX1-201ENST00000233084 MRFAP1L1Q96HT8 127 aa18.45■□□□□ 0.54
DDX1-201ENST00000233084 ELP1O95163 1332 aa18.45■□□□□ 0.54
DDX1-201ENST00000233084 CCT4P50991 539 aaKnown RBP18.45■□□□□ 0.54
DDX1-201ENST00000233084 PGBD1Q96JS3 809 aa18.45■□□□□ 0.54
DDX1-201ENST00000233084 EFCC1Q9HA90 598 aa18.45■□□□□ 0.54
DDX1-201ENST00000233084 UBXN4Q92575 508 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 SCAND2PQ9GZW5 306 aaPredicted RBP18.44■□□□□ 0.54
DDX1-201ENST00000233084 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.44■□□□□ 0.548e-7■□□□□ 11.1
DDX1-201ENST00000233084 CYP46A1Q9Y6A2 500 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 DHX16O60231 1041 aaKnown RBP18.44■□□□□ 0.54
DDX1-201ENST00000233084 OAS2P29728 719 aaKnown RBP18.44■□□□□ 0.54
DDX1-201ENST00000233084 PTH1RQ03431 593 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 HOMER1Q86YM7 354 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 IFNL2Q8IZJ0 200 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 C8orf37Q96NL8 207 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 ARGLU1Q9NWB6 273 aaPredicted RBP18.44■□□□□ 0.54
DDX1-201ENST00000233084 BCL9LQ86UU0 1499 aa18.44■□□□□ 0.54
DDX1-201ENST00000233084 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.44■□□□□ 0.54
DDX1-201ENST00000233084 COL9A3Q14050 684 aaPredicted RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 E4F1Q66K89 784 aaPredicted RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 RBM43Q6ZSC3 357 aaKnown RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 ERCC4Q92889 916 aaPredicted RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 L2HGDHQ9H9P8 463 aa18.43■□□□□ 0.54
DDX1-201ENST00000233084 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
DDX1-201ENST00000233084 ZRANB2O95218 330 aaKnown RBP eCLIP18.43■□□□□ 0.541e-7■■■■□ 19.4
DDX1-201ENST00000233084 NOP2P46087 812 aaKnown RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 PPP1R13BQ96KQ4 1090 aa18.43■□□□□ 0.54
DDX1-201ENST00000233084 SH2B1Q9NRF2 756 aaPredicted RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 SPATA31A1Q5TZJ5 1347 aa18.43■□□□□ 0.54
DDX1-201ENST00000233084 GTF2A1P52655 376 aaPredicted RBP18.43■□□□□ 0.54
DDX1-201ENST00000233084 ATP8B2P98198 1209 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms