RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 IARSP41252 1262 aaKnown RBP18.05■□□□□ 0.48
SUPT4H1-201ENST00000225504 RFX5P48382 616 aaPredicted RBP18.05■□□□□ 0.48
SUPT4H1-201ENST00000225504 MS4A1P11836 297 aa18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 LDHAL6AQ6ZMR3 332 aa18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 TBC1D16Q8TBP0 767 aa18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 ANKIB1Q9P2G1 1089 aa18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 DUOX1Q9NRD9 1551 aa18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 COL4A5P29400 1685 aa18.04■□□□□ 0.48
SUPT4H1-201ENST00000225504 C6orf229H3BNL8 230 aa18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 GNAI2P04899 355 aa18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 AOC3Q16853 763 aa18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
SUPT4H1-201ENST00000225504 SNAP23O00161 211 aa18.02■□□□□ 0.48
SUPT4H1-201ENST00000225504 RIMBP2O15034 1052 aa18.02■□□□□ 0.48
SUPT4H1-201ENST00000225504 CHRNDQ07001 517 aa18.02■□□□□ 0.48
SUPT4H1-201ENST00000225504 LRRC24Q50LG9 513 aa18.02■□□□□ 0.48
SUPT4H1-201ENST00000225504 HDAC5Q9UQL6 1122 aa18.02■□□□□ 0.48
SUPT4H1-201ENST00000225504 LTBP1Q14766 1721 aa18.02■□□□□ 0.47
SUPT4H1-201ENST00000225504 TAF5LO75529 589 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 UFL1O94874 794 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 LARGE2Q8N3Y3 721 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 RIPOR2Q9Y4F9 1068 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 XDHP47989 1333 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 DICER1Q9UPY3 1922 aaKnown RBP18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 PPIP5K2O43314 1243 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 SUPT20HQ8NEM7 779 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 ZNF526Q8TF50 670 aaPredicted RBP18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 GGA1Q9UJY5 639 aa18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 PA2G4Q9UQ80 394 aaKnown RBP18.01■□□□□ 0.47
SUPT4H1-201ENST00000225504 PNMA6EA0A0J9YXQ4 647 aa18■□□□□ 0.47
SUPT4H1-201ENST00000225504 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
SUPT4H1-201ENST00000225504 WASHC4Q2M389 1173 aa18■□□□□ 0.47
SUPT4H1-201ENST00000225504 SRGAP3O43295 1099 aa17.99■□□□□ 0.47
SUPT4H1-201ENST00000225504 ATP2B4P23634 1241 aa17.99■□□□□ 0.47
SUPT4H1-201ENST00000225504 MTX1Q13505 466 aa17.99■□□□□ 0.47
SUPT4H1-201ENST00000225504 ZNF784Q8NCA9 323 aaPredicted RBP17.99■□□□□ 0.47
SUPT4H1-201ENST00000225504 ANKRD2Q9GZV1 360 aa17.99■□□□□ 0.47
SUPT4H1-201ENST00000225504 KLRK1P26718 216 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 ATP8B2P98198 1209 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 DOK7Q18PE1 504 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 TXNRD3Q86VQ6 643 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 SIL1Q9H173 461 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 VPS33BQ9H267 617 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 ZBTB40Q9NUA8 1239 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
SUPT4H1-201ENST00000225504 FZD9O00144 591 aa17.97■□□□□ 0.47
SUPT4H1-201ENST00000225504 ATG9AQ7Z3C6 839 aa17.97■□□□□ 0.47
SUPT4H1-201ENST00000225504 JDP2Q8WYK2 163 aa17.97■□□□□ 0.47
SUPT4H1-201ENST00000225504 ZNF541Q9H0D2 1346 aa17.97■□□□□ 0.47
SUPT4H1-201ENST00000225504 TIAM2Q8IVF5 1701 aa17.97■□□□□ 0.47
SUPT4H1-201ENST00000225504 EYA2O00167 538 aa17.96■□□□□ 0.47
SUPT4H1-201ENST00000225504 ZC3H12CQ9C0D7 883 aaKnown RBP17.96■□□□□ 0.47
SUPT4H1-201ENST00000225504 DBNDD1Q9H9R9 158 aa17.96■□□□□ 0.47
SUPT4H1-201ENST00000225504 KCNQ5Q9NR82 932 aa17.96■□□□□ 0.47
SUPT4H1-201ENST00000225504 LEMD3Q9Y2U8 911 aa17.96■□□□□ 0.47
SUPT4H1-201ENST00000225504 SUPT16HQ9Y5B9 1047 aaKnown RBP17.96■□□□□ 0.47
SUPT4H1-201ENST00000225504 ZNF804BA4D1E1 1349 aa17.96■□□□□ 0.47
SUPT4H1-201ENST00000225504 GLTPD2A6NH11 291 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 YDJCA8MPS7 323 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 DDNO94850 711 aaPredicted RBP17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 NIM1KQ8IY84 436 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 EYA3Q99504 573 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 COPRSQ9NQ92 184 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 POLA2Q14181 598 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 CEP85Q6P2H3 762 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 ZNRF3Q9ULT6 936 aa17.95■□□□□ 0.46
SUPT4H1-201ENST00000225504 A0A1B0GUL6 1792 aa17.94■□□□□ 0.46
SUPT4H1-201ENST00000225504 IRS2Q9Y4H2 1338 aa17.94■□□□□ 0.46
SUPT4H1-201ENST00000225504 CXCL9Q07325 125 aa17.94■□□□□ 0.46
SUPT4H1-201ENST00000225504 METTL24Q5JXM2 366 aa17.94■□□□□ 0.46
SUPT4H1-201ENST00000225504 VGLL2Q8N8G2 317 aa17.94■□□□□ 0.46
SUPT4H1-201ENST00000225504 SSH3Q8TE77 659 aa17.94■□□□□ 0.46
SUPT4H1-201ENST00000225504 MROH5Q6ZUA9 1318 aa17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 ZC3H4Q9UPT8 1303 aaKnown RBP17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 RAD17O75943 681 aa17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 KCNJ4P48050 445 aa17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 SIRT2Q8IXJ6 389 aa17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 CRBNQ96SW2 442 aa17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.93■□□□□ 0.46
SUPT4H1-201ENST00000225504 POTECB2RU33 542 aa17.92■□□□□ 0.46
SUPT4H1-201ENST00000225504 ECE2O60344 883 aa17.92■□□□□ 0.46
SUPT4H1-201ENST00000225504 CIAO1O76071 339 aa17.92■□□□□ 0.46
SUPT4H1-201ENST00000225504 PDE8BO95263 885 aa17.92■□□□□ 0.46
SUPT4H1-201ENST00000225504 DPY19L2Q6NUT2 758 aa17.92■□□□□ 0.46
SUPT4H1-201ENST00000225504 EIF6P56537 245 aaKnown RBP17.91■□□□□ 0.46
SUPT4H1-201ENST00000225504 RRAGCQ9HB90 399 aa17.91■□□□□ 0.46
SUPT4H1-201ENST00000225504 GPBP1L1Q9HC44 474 aaPredicted RBP17.91■□□□□ 0.46
SUPT4H1-201ENST00000225504 GJA3Q9Y6H8 435 aa17.91■□□□□ 0.46
SUPT4H1-201ENST00000225504 MED23Q9ULK4 1368 aa17.91■□□□□ 0.46
SUPT4H1-201ENST00000225504 G3V3G9 751 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms