RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 LMBR1Q8WVP7 490 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 CNNM2Q9H8M5 875 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 CCDC50Q8IVM0 306 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 PICALMQ13492 652 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 PAXBP1Q9Y5B6 917 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 SPDYE3A6NKU9 549 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 FAM169AQ9Y6X4 670 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 CFAP58Q5T655 872 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 SLC4A4Q9Y6R1 1079 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 DAPK1P53355 1430 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 PSMA7O14818 248 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
UBR5-201ENST00000220959 CAVIN2O95810 425 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 KLF18A0A0U1RQI7 1052 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 NAPAP54920 295 aa16.88■□□□□ 0.29
UBR5-201ENST00000220959 NAP1L3Q99457 506 aaPredicted RBP16.88■□□□□ 0.29
UBR5-201ENST00000220959 ANKS4BQ8N8V4 417 aa16.87■□□□□ 0.29
UBR5-201ENST00000220959 NME9Q86XW9 330 aa16.87■□□□□ 0.29
UBR5-201ENST00000220959 PTGS1P23219 599 aa16.87■□□□□ 0.29
UBR5-201ENST00000220959 TERF1P54274 439 aa16.87■□□□□ 0.29
UBR5-201ENST00000220959 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.87■□□□□ 0.29
UBR5-201ENST00000220959 TACC1O75410 805 aa16.87■□□□□ 0.29
UBR5-201ENST00000220959 MAK16Q9BXY0 300 aaKnown RBP16.87■□□□□ 0.29
UBR5-201ENST00000220959 ZFYP08048 801 aaPredicted RBP16.86■□□□□ 0.29
UBR5-201ENST00000220959 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
UBR5-201ENST00000220959 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
UBR5-201ENST00000220959 NLRP3Q96P20 1036 aa16.86■□□□□ 0.29
UBR5-201ENST00000220959 PPFIA3O75145 1194 aa16.86■□□□□ 0.29
UBR5-201ENST00000220959 ARID5AQ03989 594 aa16.86■□□□□ 0.29
UBR5-201ENST00000220959 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
UBR5-201ENST00000220959 NOL3O60936 208 aaKnown RBP16.86■□□□□ 0.29
UBR5-201ENST00000220959 GMNNO75496 209 aa16.86■□□□□ 0.29
UBR5-201ENST00000220959 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
UBR5-201ENST00000220959 KCNG4Q8TDN1 519 aa16.86■□□□□ 0.29
UBR5-201ENST00000220959 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
UBR5-201ENST00000220959 ASIC1P78348 528 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 ATP2A2P16615 1042 aaKnown RBP16.85■□□□□ 0.29
UBR5-201ENST00000220959 MKRN1Q9UHC7 482 aaKnown RBP16.85■□□□□ 0.29
UBR5-201ENST00000220959 EHBP1L1Q8N3D4 1523 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 TTC14Q96N46 770 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 AMOTL2Q9Y2J4 779 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
UBR5-201ENST00000220959 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
UBR5-201ENST00000220959 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 OPA1O60313 960 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 SPAG1Q07617 926 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 ZMYND15Q9H091 742 aa16.85■□□□□ 0.29
UBR5-201ENST00000220959 SUPT6HQ7KZ85 1726 aaKnown RBP16.85■□□□□ 0.29
UBR5-201ENST00000220959 CTAGE15A4D2H0 777 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 CTAGE8P0CG41 777 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 MNAT1P51948 309 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 CTAGE6Q86UF2 777 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 CTAGE4Q8IX94 777 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 ATRIPQ8WXE1 791 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 CCT6BQ92526 530 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 HS2ST1Q7LGA3 356 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 SELENOSQ9BQE4 189 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 PI4KAP2A4QPH2 592 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 PI4KAP1Q8N8J0 262 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 ARFGAP3Q9NP61 516 aa16.84■□□□□ 0.29
UBR5-201ENST00000220959 KIF5AQ12840 1032 aa16.83■□□□□ 0.29
UBR5-201ENST00000220959 ZNF804AQ7Z570 1209 aa16.83■□□□□ 0.29
UBR5-201ENST00000220959 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.29
UBR5-201ENST00000220959 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.29
UBR5-201ENST00000220959 CFAP157Q5JU67 520 aa16.83■□□□□ 0.28
UBR5-201ENST00000220959 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.28
UBR5-201ENST00000220959 BIN2Q9UBW5 565 aaPredicted RBP16.83■□□□□ 0.28
UBR5-201ENST00000220959 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
UBR5-201ENST00000220959 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
UBR5-201ENST00000220959 CTAGE9A4FU28 777 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 HSP90AA4PQ58FG1 418 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 KRT83P78385 493 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
UBR5-201ENST00000220959 HAUS7Q99871 368 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 TRIM7Q9C029 511 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 JAKMIP2Q96AA8 810 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 TTC21BQ7Z4L5 1316 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 ATP6V1AP38606 617 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 ZC3H12CQ9C0D7 883 aaKnown RBP16.82■□□□□ 0.28
UBR5-201ENST00000220959 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 KRT79Q5XKE5 535 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 GIMAP6Q6P9H5 292 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 NEK11Q8NG66 645 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 MAGEB6P1A0A0J9YX57 407 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 CALML3P27482 149 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
UBR5-201ENST00000220959 TBC1D9Q6ZT07 1266 aa16.81■□□□□ 0.28
UBR5-201ENST00000220959 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
UBR5-201ENST00000220959 GEN1Q17RS7 908 aa16.81■□□□□ 0.28
UBR5-201ENST00000220959 ATP2B3Q16720 1220 aa16.81■□□□□ 0.28
UBR5-201ENST00000220959 MCM6Q14566 821 aa16.81■□□□□ 0.28
UBR5-201ENST00000220959 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms