RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PPP4R4Q6NUP7 873 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 TTLL7Q6ZT98 887 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 NUDT18Q6ZVK8 323 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 TTC30AQ86WT1 665 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 CRNKL1Q9BZJ0 848 aaKnown RBP3.9□□□□□ -1.78
NEB-201ENST00000172853 PPP6R1Q9UPN7 881 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 BIRC3Q13489 604 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 ZNF804AQ7Z570 1209 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 JAKMIP2Q96AA8 810 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 MBIPQ9NS73 344 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 CCDC87Q9NVE4 849 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 TFCP2L1Q9NZI6 479 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 MARCKSP29966 332 aaPredicted RBP3.9□□□□□ -1.78
NEB-201ENST00000172853 ABI1Q8IZP0 508 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 SETDB2Q96T68 719 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 AS3MTQ9HBK9 375 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 RAD54L2Q9Y4B4 1467 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 TSPY3P0CV98 308 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 TSPY8P0CW00 308 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 MCF2L2Q86YR7 1114 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 PLEKHG3A1L390 1219 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 GNAQP50148 359 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 NOX5Q96PH1 765 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 STMN4Q9H169 189 aaPredicted RBP3.9□□□□□ -1.79
NEB-201ENST00000172853 TSPY2A6NKD2 308 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 ZNF165P49910 485 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 C8orf37Q96NL8 207 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 CARMIL1Q5VZK9 1371 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 POLR2BP30876 1174 aaKnown RBP3.9□□□□□ -1.79
NEB-201ENST00000172853 SARNPP82979 210 aaKnown RBP3.9□□□□□ -1.79
NEB-201ENST00000172853 ATP6V0A1Q93050 837 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 ZNF830Q96NB3 372 aaPredicted RBP3.9□□□□□ -1.79
NEB-201ENST00000172853 NLRP3Q96P20 1036 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 STX10O60499 249 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 WASHC5Q12768 1159 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 ATP6V1E2Q96A05 226 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 TTC1Q99614 292 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 HMOX1P09601 288 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 SLC12A2P55011 1212 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 CFAP100Q494V2 611 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 NBPF6Q5VWK0 638 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 NBPF5PQ86XG9 351 aaPredicted RBP3.9□□□□□ -1.79
NEB-201ENST00000172853 NBPF4Q96M43 638 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 CSRNP2Q9H175 543 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 RPGRIP1LQ68CZ1 1315 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 EXOC6Q8TAG9 804 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 DDX11Q96FC9 970 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 CCDC192P0DO97 292 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 STMN1P16949 149 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 KRT85P78386 507 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 TTC14Q96N46 770 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 MRVI1Q9Y6F6 885 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 PPFIA1Q13136 1202 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 CALCOCO2Q13137 446 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 LMBR1Q8WVP7 490 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 TRIM7Q9C029 511 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 ODR4Q5SWX8 454 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 MTIF3Q9H2K0 278 aaKnown RBP3.9□□□□□ -1.79
NEB-201ENST00000172853 ARHGEF10LQ9HCE6 1279 aa3.9□□□□□ -1.79
NEB-201ENST00000172853 G3BP2Q9UN86 482 aaKnown RBP3.9□□□□□ -1.79
NEB-201ENST00000172853 DPYDQ12882 1025 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 ZBED9Q6R2W3 1325 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 EFCAB14O75071 495 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 RILPL1Q5EBL4 403 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 SDCCAG8Q86SQ7 713 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 CCDC102AQ96A19 550 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 HVCN1Q96D96 273 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 CAPN15O75808 1086 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 NBPF7P0C2Y1 421 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 EEF2P13639 858 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 SND1Q7KZF4 910 aaKnown RBP eCLIP3.89□□□□□ -1.79
NEB-201ENST00000172853 TMEM106CQ9BVX2 250 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 IPO11Q9UI26 975 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 RAD50Q92878 1312 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 ZSCAN12O43309 604 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 S100BP04271 92 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 GBP6Q6ZN66 633 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 MSH6P52701 1360 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 RAPGEF3O95398 923 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 SETSIPP0DME0 302 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 MRE11P49959 708 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 NEK4P51957 841 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 MPRIPQ6WCQ1 1025 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 PNMA8AQ86V59 439 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 C22orf23Q9BZE7 217 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 EIF2B5Q13144 721 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 NONOQ15233 471 aaKnown RBP eCLIP3.89□□□□□ -1.79
NEB-201ENST00000172853 FASTKD5Q7L8L6 764 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 TNMDQ9H2S6 317 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 FMN1Q68DA7 1419 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 KRT3P12035 628 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 TRPC3Q13507 836 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 KANK3Q6NY19 840 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 RDH13Q8NBN7 331 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 COPRSQ9NQ92 184 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 FNDC3AQ9Y2H6 1198 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 ARHGAP5Q13017 1502 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 CUX2O14529 1486 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 ZBED4O75132 1171 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 PLCG2P16885 1265 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms