RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 RTTNQ86VV8 2226 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 MS4A18H0YCH9 400 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 GMFGO60234 142 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 KHDRBS3O75525 346 aaKnown RBP15.34■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF432O94892 652 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 CD46P15529 392 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF43P17038 809 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 PTNP21246 168 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 S100A5P33763 92 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 RANBP1P43487 201 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 RORCP51449 518 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 OR2B6P58173 313 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 GPR85P60893 370 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 ADORA2A-AS1P86434 159 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 HSF1Q00613 529 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 MS4A18Q3C1V0 323 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF404Q494X3 552 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 TEX30Q5JUR7 227 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 PRAMEF20Q5VT98 475 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 SLC35D2Q76EJ3 337 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 RHOUQ7L0Q8 258 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 TRILQ7L0X0 811 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 VASH1Q7L8A9 365 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-234ENST00000642041 IGFN1Q86VF2 1251 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 BEST3Q8N1M1 668 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 ACBD4Q8NC06 268 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 ATP6V1C2Q8NEY4 427 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 OR6K6Q8NGW6 343 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 POC1BQ8TC44 478 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 SPRYD4Q8WW59 207 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-234ENST00000642041 RASD2Q96D21 266 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF649Q9BS31 505 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 OR2B2Q9GZK3 357 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 WDR76Q9H967 626 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 FBXL2Q9UKC9 423 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 PEX16Q9Y5Y5 336 aa15.34■□□□□ 0.05
PHGDH-234ENST00000642041 A0A075B6Q4 140 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 C2orf72A6NCS6 295 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 AQP7P3A6NL99 342 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 C11orf98E9PRG8 122 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 GATBO75879 557 aaKnown RBP15.33■□□□□ 0.04
PHGDH-234ENST00000642041 CLDN14O95500 239 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 KLK2P20151 261 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 PAX7P23759 505 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 PEX19P40855 299 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 GUCA1AP43080 201 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-234ENST00000642041 AGFG1P52594 562 aaKnown RBP15.33■□□□□ 0.04
PHGDH-234ENST00000642041 RAC3P60763 192 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 VBP1P61758 197 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 MFAP5Q13361 173 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 DCTN2Q13561 401 aaKnown RBP15.33■□□□□ 0.04
PHGDH-234ENST00000642041 SPCS2Q15005 226 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 SSX1Q16384 188 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 HYAL4Q2M3T9 481 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 MESTQ5EB52 335 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 LIPKQ5VXJ0 399 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 RAET1LQ5VY80 246 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 DEGS2Q6QHC5 323 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 TPRA1Q86W33 373 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 TMEM178AQ8NBL3 297 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 OR6X1Q8NH79 312 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 HAS2Q92819 552 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 INTS14Q96SY0 518 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 CHCHD6Q9BRQ6 235 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 OR11A1Q9GZK7 315 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 TSPAN10Q9H1Z9 355 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-234ENST00000642041 CXXC4Q9H2H0 198 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 MED20Q9H944 212 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 PROK2Q9HC23 129 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 EXOSC4Q9NPD3 245 aaKnown RBP15.33■□□□□ 0.04
PHGDH-234ENST00000642041 B9D1Q9UPM9 204 aa15.33■□□□□ 0.04
PHGDH-234ENST00000642041 LOC100506127A0A0U1RQW1 187 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 SLC22A23A1A5C7 686 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF726A6NNF4 738 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 OGG1O15527 345 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF254O75437 659 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 IGHG1P01857 330 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 KRT8P05787 483 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 IMPDH2P12268 514 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF823P16415 610 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 CELP19835 753 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 CRYBB2P43320 205 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF846Q147U1 533 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 BCL2A1Q16548 175 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 TMEM176BQ3YBM2 270 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-234ENST00000642041 LINC01590Q5TEZ4 76 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 OR2G6Q5TZ20 316 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 BICRALQ6AI39 1079 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 ASB10Q8WXI3 467 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 BORCS5Q969J3 196 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 SLC25A44Q96H78 314 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-234ENST00000642041 ARL5BQ96KC2 179 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 OR5B2Q96R09 309 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 MDFIQ99750 246 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 TTYH2Q9BSA4 534 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 HCAR1Q9BXC0 346 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 SRA1Q9HD15 236 aaKnown RBP15.32■□□□□ 0.04
PHGDH-234ENST00000642041 LAMP5Q9UJQ1 280 aa15.32■□□□□ 0.04
PHGDH-234ENST00000642041 FLNAP21333 2647 aaKnown RBP15.31■□□□□ 0.04
PHGDH-234ENST00000642041 A0A1W2PQL4 384 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms