RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CORO6Q6QEF8 472 aa12.49□□□□□ -0.41
PHGDH-233ENST00000642021 FAM160A2Q8N612 972 aaPredicted RBP12.49□□□□□ -0.41
PHGDH-233ENST00000642021 OTOSQ8NHW6 89 aa12.49□□□□□ -0.41
PHGDH-233ENST00000642021 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
PHGDH-233ENST00000642021 FAM3DQ96BQ1 224 aa12.49□□□□□ -0.41
PHGDH-233ENST00000642021 NRSN2Q9GZP1 204 aa12.49□□□□□ -0.41
PHGDH-233ENST00000642021 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
PHGDH-233ENST00000642021 SPTY2D1-AS1A0A0U1RR47 76 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 TCRBV16S1A1N1A0A5B0 115 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 UBE2QL1A1L167 161 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 CDC14CA4D256 554 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 SRPX2O60687 465 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-233ENST00000642021 WNT11O96014 354 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 CTSEP14091 401 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 HYAL1Q12794 435 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 TMEM205Q6UW68 189 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 HDDC2Q7Z4H3 204 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 MDGA2Q7Z553 956 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 CLEC1AQ8NC01 280 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 PNO1Q9NRX1 252 aaKnown RBP12.48□□□□□ -0.41
PHGDH-233ENST00000642021 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 LRP4O75096 1905 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 SEC16AO15027 2179 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 HMSDA8MTL9 139 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 CHURC1-FNTBB4DL54 471 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 ATP6V1G2-DDX39BF2Z307 99 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 TRIM77I1YAP6 450 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 IL33O95760 270 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 RENP00797 406 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 HLA-DQA2P01906 255 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 CSF1P09603 554 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 FAUP35544 74 aaKnown RBP12.48□□□□□ -0.41
PHGDH-233ENST00000642021 HSD17B7P56937 341 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 POLR2GP62487 172 aaKnown RBP eCLIP12.48□□□□□ -0.41
PHGDH-233ENST00000642021 EMC4Q5J8M3 183 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 TMEM81Q6P7N7 255 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 STPG2Q8N412 459 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 CCNL2Q96S94 520 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-233ENST00000642021 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 ADAM19Q9H013 955 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
PHGDH-233ENST00000642021 TMEM138Q9NPI0 162 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 EXOSC3Q9NQT5 275 aaKnown RBP12.48□□□□□ -0.41
PHGDH-233ENST00000642021 PRODH2Q9UF12 536 aa12.48□□□□□ -0.41
PHGDH-233ENST00000642021 F5H5P2 479 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 DOK2O60496 412 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZNF432O94892 652 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 THEGLP0DJG4 465 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZP3P21754 424 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 PRSS3P35030 304 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZNF117Q03924 483 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 RASGEF1BQ0VAM2 473 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 BTN1A1Q13410 526 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 OR6M1Q8NGM8 313 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 TSPAN4O14817 238 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ICOSLGO75144 302 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 RP2O75695 350 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 AKAIN1P0CW23 69 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 EN2P19622 333 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 SLC17A1Q14916 467 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 FAM166AQ6J272 317 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 OR1J4Q8NGS1 313 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 DUSP19Q8WTR2 217 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 SCARB1Q8WTV0 552 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 TNFAIP8L1Q8WVP5 186 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 SLC25A36Q96CQ1 311 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZNF578Q96N58 590 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ATG5Q9H1Y0 275 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 APMAPQ9HDC9 416 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 MRPL22Q9NWU5 206 aaKnown RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 MYEF2Q9P2K5 600 aaKnown RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 B9D1Q9UPM9 204 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 TMEM14AQ9Y6G1 99 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 PIAS3Q9Y6X2 628 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 PRAMEF26H0Y7S4 382 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 BGLAPP02818 100 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 CD1CP29017 333 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 GABRA4P48169 554 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 SCAND1P57086 179 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 SORDQ00796 357 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 C4orf46Q504U0 113 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 B3GNTL1Q67FW5 361 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZNF660Q6AZW8 331 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 STEAP1BQ6NZ63 245 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 TSSK4Q6SA08 328 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 GSG1LQ6UXU4 331 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZBTB44Q8NCP5 570 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 TSLPQ969D9 159 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 PPA2Q9H2U2 334 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZMAT3Q9HA38 289 aaKnown RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
PHGDH-233ENST00000642021 ZNF230Q9UIE0 474 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-233ENST00000642021 SLC17A2O00624 439 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 HCRTR2O43614 444 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 PPP3CBP16298 524 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 CALCRP30988 508 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms