RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 DEPDC4Q8N2C3 294 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 UBE2J2Q8N2K1 259 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 PQLC1Q8N2U9 271 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 LINC00471Q8N535 108 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 IQCF1Q8N6M8 205 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 CLDN22Q8N7P3 220 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 ICA1LQ8NDH6 482 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 NOXO1Q8NFA2 376 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 OR4Q3Q8NH05 313 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 OR5K1Q8NHB7 308 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF519Q8TB69 540 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 RASD2Q96D21 266 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF837Q96EG3 531 aaPredicted RBP6.45□□□□□ -1.38
PHGDH-225ENST00000641720 CENPNQ96H22 339 aaPredicted RBP6.45□□□□□ -1.38
PHGDH-225ENST00000641720 SAMD8Q96LT4 415 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 Q96M85 177 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 SOX7Q9BT81 388 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 SMURF2Q9HAU4 748 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 NPAP1Q9NZP6 1156 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 TMEFF2Q9UIK5 374 aaPredicted RBP6.45□□□□□ -1.38
PHGDH-225ENST00000641720 MGAT4BQ9UQ53 548 aa6.45□□□□□ -1.38
PHGDH-225ENST00000641720 IGKV1D-43A0A0B4J1Z2 117 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 G3V2T6 193 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 M0R3G1 203 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 AKAP8O43823 692 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 LMX1BO60663 402 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 SLC43A1O75387 559 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 LYZL6O75951 148 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 SEC14L2O76054 403 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 BCL10O95999 233 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 PGA4P0DJD7 388 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 PGA3P0DJD8 388 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 GSTM3P21266 225 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 CALRP27797 417 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 SLC6A6P31641 620 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 CSNK1A1P48729 337 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 DAPP51397 102 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 DAP3P51398 398 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 CTXN1P60606 82 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 PRPS1P60891 318 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 RPL27P61353 136 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 FMODQ06828 376 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 FAPQ12884 760 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 KRR1Q13601 381 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 RFX4Q33E94 735 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 ANKDD1AQ495B1 522 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 SLC36A3Q495N2 470 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 CD300LDQ6UXZ3 194 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 PTCHD4Q6ZW05 846 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 STK32CQ86UX6 486 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF525Q8N782 197 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 ATG16L2Q8NAA4 619 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 SYT14Q8NB59 555 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 SEMA6DQ8NFY4 1073 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 OR6X1Q8NH79 312 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 C10orf105Q8TEF2 133 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 HTRA1Q92743 480 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 HDAC2Q92769 488 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 STMN2Q93045 179 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 TMEM54Q969K7 222 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 S100PBPQ96BU1 408 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 NMD3Q96D46 503 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 NRBF2Q96F24 287 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 TRMT61AQ96FX7 289 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 SLC25A44Q96H78 314 aaPredicted RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 ADAD1Q96M93 576 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF570Q96NI8 536 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 KCNK17Q96T54 332 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 CIB1Q99828 191 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 BEX2Q9BXY8 128 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 MRPL13Q9BYD1 178 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 LINC00470Q9BZP3 86 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 TXNIPQ9H3M7 391 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 NRIP3Q9NQ35 241 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 TBC1D23Q9NUY8 699 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 PARPBPQ9NWS1 579 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 KIF17Q9P2E2 1029 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF346Q9UL40 294 aaKnown RBP6.44□□□□□ -1.38
PHGDH-225ENST00000641720 GPR52Q9Y2T5 361 aa6.44□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF587BE7ETH6 402 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 BHLHE40O14503 412 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 SOCS2O14508 198 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 EI24O14681 340 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 SSX4O60224 188 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 TRMUO75648 421 aaKnown RBP6.43□□□□□ -1.38
PHGDH-225ENST00000641720 RAD51DO75771 328 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 SLC2A10O95528 541 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 BAG2O95816 211 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 TXNDC12O95881 172 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 IGHG1P01857 330 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 ANXA8P13928 327 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 ANPEPP15144 967 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 ACADSP16219 412 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 HIST1H1CP16403 213 aaKnown RBP6.43□□□□□ -1.38
PHGDH-225ENST00000641720 EPHA2P29317 976 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 SDHAP31040 664 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 COMPP49747 757 aaPredicted RBP6.43□□□□□ -1.38
PHGDH-225ENST00000641720 MYBPC1Q00872 1141 aa6.43□□□□□ -1.38
PHGDH-225ENST00000641720 ROR2Q01974 943 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms