RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 CIRBPQ14011 172 aaKnown RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 VEZF1Q14119 521 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CYBRD1Q53TN4 286 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ARSIQ5FYB1 569 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ENTPD8Q5MY95 495 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 PRAMEF8Q5VWM4 474 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 PRAMEF7Q5VXH5 474 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 KIAA1211LQ6NV74 962 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 MRPL10Q7Z7H8 261 aaKnown RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 TMEM151AQ8N4L1 468 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 VN1R2Q8NFZ6 395 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 NUDCD2Q8WVJ2 157 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 NICN1Q9BSH3 213 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ABCG5Q9H222 651 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 DNAJC18Q9H819 358 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SPACA1Q9HBV2 294 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 MYOZ1Q9NP98 299 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 OBP2AQ9NY56 170 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 HSPE1-MOB4S4R3N1 261 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 TEX50A0A1B0GTY4 177 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 UMAD1C9J7I0 102 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 FMO6PO60774 539 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 FZD7O75084 574 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 TBX10O75333 385 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SLC43A1O75387 559 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 GADD45GO95257 159 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CD48P09326 243 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CTXN2P0C2S0 81 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 EDNRBP24530 442 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 GDNFP39905 211 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 FRKP42685 505 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 GZMKP49863 264 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 LIMK1P53667 647 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ZNF763Q0D2J5 394 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 KCNJ11Q14654 390 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 PCGF3Q3KNV8 242 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 GLYR1Q49A26 553 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 PLAC9Q5JTB6 97 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 TMIGD1Q6UXZ0 262 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ASRGL1Q7L266 308 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 GRINAQ7Z429 371 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SELENOHQ8IZQ5 122 aaKnown RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 KLHDC1Q8N7A1 406 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 HMCESQ96FZ2 354 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 TAAR6Q96RI8 345 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 PITX2Q99697 317 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 RBM24Q9BX46 236 aaKnown RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 AKTIPQ9H8T0 292 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 NRN1Q9NPD7 142 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 GLRX2Q9NS18 164 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 LOC100130705A0A1B0GUX0 176 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ZNF860A6NHJ4 632 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 A6NL46 340 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 B4E171 279 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CDX4O14627 284 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 AKR7A2O43488 359 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 GSTZ1O43708 216 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 SLC25A20O43772 301 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CD3EP07766 207 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SRFP11831 508 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 GABRR1P24046 479 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ZNF93P35789 620 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 WASP42768 502 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CLCN3P51790 818 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 RAB1AP62820 205 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CXCL9Q07325 125 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 PDCD1Q15116 288 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 TAF1AQ15573 450 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 SLC16A14Q7RTX9 510 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 FJX1Q86VR8 437 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 ADGRG3Q86Y34 549 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SAT2Q96F10 170 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 FOXN4Q96NZ1 517 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 OR6C1Q96RD1 312 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 KCNK17Q96T54 332 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 RASL11BQ9BPW5 248 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SPANXDQ9BXN6 97 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 NMNAT2Q9BZQ4 307 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 NKX6-2Q9C056 277 aaPredicted RBP2.58□□□□□ -2
SCN1A-219ENST00000641575 CA10Q9NS85 328 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SPANXCQ9NY87 97 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 CYB5R1Q9UHQ9 305 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 PPT2Q9UMR5 302 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 SIPA1L1O43166 1804 aa2.58□□□□□ -2
SCN1A-219ENST00000641575 NUP153P49790 1475 aaKnown RBP2.57□□□□□ -2
SCN1A-219ENST00000641575 ZC3H12DA2A288 527 aaKnown RBP2.57□□□□□ -2
SCN1A-219ENST00000641575 PGPA6NDG6 321 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 MEIS3P2A8K0S8 358 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 ZNF736B4DX44 427 aaPredicted RBP2.57□□□□□ -2
SCN1A-219ENST00000641575 G3V3Q6 166 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 M0QZK8 103 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 AQP7O14520 342 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 SMPD2O60906 423 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 GGCTO75223 188 aaKnown RBP2.57□□□□□ -2
SCN1A-219ENST00000641575 CSO75390 466 aaKnown RBP2.57□□□□□ -2
SCN1A-219ENST00000641575 VAMP5O95183 116 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 ZIC2O95409 532 aaPredicted RBP2.57□□□□□ -2
SCN1A-219ENST00000641575 SIX6O95475 246 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 KLK1P06870 262 aa2.57□□□□□ -2
SCN1A-219ENST00000641575 AKAIN1P0CW23 69 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms