RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 MEP1BQ16820 701 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 KLHL26Q53HC5 615 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 EEF1A1P5Q5VTE0 462 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 OR1J4Q8NGS1 313 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CCDC107Q8WV48 283 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 LIPHQ8WWY8 451 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF75AQ96N20 296 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 DGAT2Q96PD7 388 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 NPAS1Q99742 590 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 OR10A5Q9H207 317 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ZMAT3Q9HA38 289 aaKnown RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 TAS2R3Q9NYW6 316 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CPNE7Q9UBL6 633 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 PLCL2Q9UPR0 1127 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CHD9Q3L8U1 2897 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 NDUFA2O43678 99 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 PNPP00491 289 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 PNMTP11086 282 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 STARP49675 285 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 TFF2Q03403 129 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ATPAF1Q5TC12 328 aaPredicted RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 MCATQ8IVS2 390 aaKnown RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 BOLLQ8N9W6 283 aaKnown RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 BPIFCQ8NFQ6 507 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF416Q9BWM5 594 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 POTEKPQ9BYX7 375 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 PRTFDC1Q9NRG1 225 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 MYEF2Q9P2K5 600 aaKnown RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 UPB1Q9UBR1 384 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CLDN16Q9Y5I7 305 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 OR5H14A6NHG9 310 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 C11orf98E9PRG8 122 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 HLA-DQA2P01906 255 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CSN2P05814 226 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 HOXC4P09017 264 aaPredicted RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CFPP27918 469 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CENPAP49450 140 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 MC2RQ01718 297 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 SKP2Q13309 424 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ATXN7L3Q14CW9 347 aaPredicted RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 FAM166AQ6J272 317 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 JMJD6Q6NYC1 403 aaPredicted RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 POMZP3Q6PJE2 187 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM184AQ6ZMB5 413 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 MED25Q71SY5 747 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF440Q8IYI8 595 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CLRN3Q8NCR9 226 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 OTOSQ8NHW6 89 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 TAAR8Q969N4 342 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ELSPBP1Q96BH3 223 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 SEC22AQ96IW7 307 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 RPP25Q9BUL9 199 aaKnown RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 TCEAL2Q9H3H9 227 aaPredicted RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 PCDHB16Q9NRJ7 776 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 CGGBP1Q9UFW8 167 aaPredicted RBP9.86□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM14AQ9Y6G1 99 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 A0A0D9SG52 128 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 KANTRA0A1W2PQU2 76 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 CELA2BP08218 269 aaPredicted RBP9.85□□□□□ -0.83
SNIP1-204ENST00000638725 RNH1P13489 461 aaKnown RBP9.85□□□□□ -0.83
SNIP1-204ENST00000638725 HPGDP15428 266 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF28P17035 718 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 AGTR1P30556 359 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 NTSR1P30989 418 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DHRS2Q13268 280 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNIP1-204ENST00000638725 SCGB2B2Q4G0G5 96 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 FNDC7Q5VTL7 733 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 ARHGEF39Q8N4T4 335 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 KCNRGQ8N5I3 272 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM229BQ8NBD8 167 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 AVL9Q8NBF6 648 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 OR5M8Q8NGP6 311 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 OR10Z1Q8NGY1 313 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 NARS2Q96I59 477 aaKnown RBP9.85□□□□□ -0.83
SNIP1-204ENST00000638725 OR8B4Q96RC9 309 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 SFXN1Q9H9B4 322 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 EPHA6Q9UF33 1036 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 FARSAQ9Y285 508 aaKnown RBP9.85□□□□□ -0.83
SNIP1-204ENST00000638725 A0A1B0GW55 424 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 A0A1W2PQF6 199 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 PCP4L1A6NKN8 68 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DOK2O60496 412 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 PLGP00747 810 aaPredicted RBP9.85□□□□□ -0.83
SNIP1-204ENST00000638725 CD8AP01732 235 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 MELTFP08582 738 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF735P0CB33 412 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DUX4L2P0CJ85 424 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DUX4L3P0CJ86 424 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DUX4L4P0CJ87 422 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DUX4L5P0CJ88 424 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DUX4L6P0CJ89 424 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 DUX4L7P0CJ90 424 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 HOXB2P14652 356 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 TACR3P29371 465 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 PBX2P40425 430 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 MFGE8Q08431 387 aaPredicted RBP9.85□□□□□ -0.83
SNIP1-204ENST00000638725 SLC17A1Q14916 467 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 TAF13Q15543 124 aa9.85□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM240Q5SV17 173 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms