RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CTF1Q16619 201 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 VN1R4Q7Z5H5 301 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 OR6M1Q8NGM8 313 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 FYTTD1Q96QD9 318 aaKnown RBP13.1□□□□□ -0.31
SCARB2-208ENST00000638372 PPA2Q9H2U2 334 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 FBXO8Q9NRD0 319 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 GPATCH2Q9NW75 528 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 AGAP14A8MT82 685 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 FAM166BA8MTA8 275 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 CELA2BP08218 269 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-208ENST00000638372 APOBEC1P41238 236 aaKnown RBP13.1□□□□□ -0.31
SCARB2-208ENST00000638372 ALKAL2Q6UX46 152 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 GPR119Q8TDV5 335 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 VRK1Q99986 396 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-208ENST00000638372 MICU1Q9BPX6 476 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 NIPAL2Q9H841 368 aa13.1□□□□□ -0.31
SCARB2-208ENST00000638372 TAF1LQ8IZX4 1826 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 ZGLP1P0C6A0 271 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 GK2Q14410 553 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-208ENST00000638372 GPR155Q7Z3F1 870 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 C10orf111Q8N326 155 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 CTSFQ9UBX1 484 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 HTR4Q13639 388 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 TPBGQ13641 420 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 TMEM185AQ8NFB2 350 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 NT5CQ8TCD5 201 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 COX14Q96I36 57 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 YKT6O15498 198 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 TSPAN15O95858 294 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 DGCR2P98153 550 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-208ENST00000638372 BHLHE23Q8NDY6 225 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 LAT2Q9GZY6 243 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 BANF2Q9H503 90 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 SLC22A13Q9Y226 551 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 LOC107986453A0A1B0GWG9 222 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 DSCR3O14972 297 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 RPS18P62269 152 aaKnown RBP13.09□□□□□ -0.31
SCARB2-208ENST00000638372 BATF2Q8N1L9 274 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 GJC3Q8NFK1 279 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 OR52I2Q8NH67 350 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 OR1S1Q8NH92 325 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 PSMF1Q92530 271 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 GON7Q9BXV9 100 aa13.09□□□□□ -0.31
SCARB2-208ENST00000638372 PLSCR5A0PG75 271 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 PRAMEF27A3QJZ7 478 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 F8W036 122 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 SIX6O95475 246 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 IFNA2P01563 188 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 IGHEP01854 428 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 MAP2K6P52564 334 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 BLOC1S1P78537 153 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 FZD2Q14332 565 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 GPR176Q14439 515 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 EXT1Q16394 746 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 CPEB2Q7Z5Q1 589 aaKnown RBP13.08□□□□□ -0.32
SCARB2-208ENST00000638372 LILRB2Q8N423 598 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 OR5L1Q8NGL2 311 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-208ENST00000638372 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 FKRPQ9H9S5 495 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 CHST11Q9NPF2 352 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 KCNG2Q9UJ96 466 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 LOC100289279A0A1B0GTE1 492 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 ADAM23O75077 832 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 MOSPD3O75425 235 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 EDN3P14138 238 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 CCR9P51686 369 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 DMRTC1Q5HYR2 192 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF684Q5T5D7 378 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 VHLLQ6RSH7 139 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 GLIPR1L1Q6UWM5 242 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 RAB11FIP2Q7L804 512 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 KLHDC8BQ8IXV7 354 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 THOC3Q96J01 351 aaKnown RBP13.08□□□□□ -0.32
SCARB2-208ENST00000638372 TXNDC15Q96J42 360 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 C20orf141Q9NUB4 165 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 HRH3Q9Y5N1 445 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 IGHV5-51A0A0C4DH38 117 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 TK1P04183 234 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 QDPRP09417 244 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 PCBP4P57723 403 aaKnown RBP13.08□□□□□ -0.32
SCARB2-208ENST00000638372 SLC7A6Q92536 515 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 WDR34Q96EX3 536 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 COPS3Q9UNS2 423 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 CCL27Q9Y4X3 112 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 A0A1W2PS29 197 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 FBXO24O75426 580 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 ZNF679Q8IYX0 411 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 OR4Q3Q8NH05 313 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 RNF170Q96K19 258 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 FAM60AQ9NP50 221 aa13.08□□□□□ -0.32
SCARB2-208ENST00000638372 B3GNT2Q9NY97 397 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms