RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ACOT11Q8WXI4 607 aaPredicted RBP16.31■□□□□ 0.2
CLN6-221ENST00000637494 C11orf40Q8WZ69 217 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 NSMAFQ92636 917 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 HSH2DQ96JZ2 352 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 BCL2L14Q9BZR8 327 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 FZR1Q9UM11 496 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 FAM32AQ9Y421 112 aaKnown RBP16.31■□□□□ 0.2
CLN6-221ENST00000637494 ABCA1O95477 2261 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 J3KTA2 159 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 SNAP29O95721 258 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 FAM157BP0CG42 384 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 ALDH3B1P43353 468 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 KLF3P57682 345 aaPredicted RBP16.3■□□□□ 0.2
CLN6-221ENST00000637494 ICA1LQ8NDH6 482 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 OR51A7Q8NH64 312 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 SYNPRQ8TBG9 265 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 HDAC2Q92769 488 aaKnown RBP16.3■□□□□ 0.2
CLN6-221ENST00000637494 CHODLQ9H9P2 273 aa16.3■□□□□ 0.2
CLN6-221ENST00000637494 EIF3KQ9UBQ5 218 aaKnown RBP16.3■□□□□ 0.2
CLN6-221ENST00000637494 TGFAP01135 160 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 IGHMP01871 453 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 MT-ND5P03915 603 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 CCL2P13500 99 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 TCN1P20061 433 aaPredicted RBP16.29■□□□□ 0.2
CLN6-221ENST00000637494 MAKP20794 623 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 DRD4P21917 467 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 CCNOP22674 350 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 CDAP32320 146 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 RPL4P36578 427 aaKnown RBP16.29■□□□□ 0.2
CLN6-221ENST00000637494 PSME3P61289 254 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 PCBD1P61457 104 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 FMODQ06828 376 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 TMEM154Q6P9G4 183 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 MBOAT2Q6ZWT7 520 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 CPLX4Q7Z7G2 160 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 LRP11Q86VZ4 500 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 TREML1Q86YW5 311 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 ALDH16A1Q8IZ83 802 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 ZNF519Q8TB69 540 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 HPS1Q92902 700 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 MSI2Q96DH6 328 aaKnown RBP16.29■□□□□ 0.2
CLN6-221ENST00000637494 FAM107BQ9H098 131 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 OR51B6Q9H340 312 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 ANKRD19PQ9H560 264 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 SPAG4Q9NPE6 437 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 KRCC1Q9NPI7 259 aaPredicted RBP16.29■□□□□ 0.2
CLN6-221ENST00000637494 SLCO1C1Q9NYB5 712 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 GMPR2Q9P2T1 348 aaKnown RBP16.29■□□□□ 0.2
CLN6-221ENST00000637494 GRHPRQ9UBQ7 328 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 TMEM5Q9Y2B1 443 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 SNX13Q9Y5W8 968 aa16.29■□□□□ 0.2
CLN6-221ENST00000637494 TRAV27A0A087WT01 109 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 XKRYO14609 159 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 STOMP27105 288 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 APEX1P27695 318 aaKnown RBP16.28■□□□□ 0.2
CLN6-221ENST00000637494 PRDX6P30041 224 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 UCP2P55851 309 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 MAD2L1BPQ15013 274 aaPredicted RBP16.28■□□□□ 0.2
CLN6-221ENST00000637494 MSMPQ1L6U9 139 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 PABPC1L2AQ5JQF8 200 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 C8orf82Q6P1X6 216 aaPredicted RBP16.28■□□□□ 0.2
CLN6-221ENST00000637494 SLC25A47Q6Q0C1 308 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 IGFN1Q86VF2 1251 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 RDH5Q92781 318 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 MDFIQ99750 246 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 MAN2C1Q9NTJ4 1040 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 ADA2Q9NZK5 511 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 TAAR3PQ9P1P4 343 aa16.28■□□□□ 0.2
CLN6-221ENST00000637494 SAMD4AQ9UPU9 718 aaKnown RBP16.28■□□□□ 0.2
CLN6-221ENST00000637494 A0A087WUU8 490 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 A0A1W2PPL8 197 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 MMP7P09237 267 aaPredicted RBP16.27■□□□□ 0.2
CLN6-221ENST00000637494 TACSTD2P09758 323 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 NCK1P16333 377 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 ZNF32P17041 273 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 GDI2P50395 445 aaKnown RBP16.27■□□□□ 0.2
CLN6-221ENST00000637494 SEC24CP53992 1094 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 KRT72Q14CN4 511 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 FAM27BQ5VT28 67 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 GLYATQ6IB77 296 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 CXXC5Q7LFL8 322 aaKnown RBP16.27■□□□□ 0.2
CLN6-221ENST00000637494 NMNAT1Q9HAN9 279 aaPredicted RBP16.27■□□□□ 0.2
CLN6-221ENST00000637494 MYEF2Q9P2K5 600 aaKnown RBP16.27■□□□□ 0.2
CLN6-221ENST00000637494 ABCD2Q9UBJ2 740 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 UGT2A1Q9Y4X1 527 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 ENPP4Q9Y6X5 453 aa16.27■□□□□ 0.2
CLN6-221ENST00000637494 LRP5LA4QPB2 252 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 LYNX1G3V0Z9 82 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 FFAR1O14842 300 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 IGFBP1P08833 259 aaPredicted RBP16.26■□□□□ 0.19
CLN6-221ENST00000637494 CST2P09228 141 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 LYNX1P0DP58 116 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 NAT2P11245 290 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 ZNF250P15622 560 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 SRD5A1P18405 259 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 ACHEP22303 614 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 GCH1P30793 250 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 GPR4P46093 362 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 GPR6P46095 362 aaPredicted RBP16.26■□□□□ 0.19
CLN6-221ENST00000637494 RIN1Q13671 783 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms