RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 FZR1Q9UM11 496 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PSMD13Q9UNM6 376 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 B9D1Q9UPM9 204 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MRPS28Q9Y2Q9 187 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MRPS7Q9Y2R9 242 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 HEY1Q9Y5J3 304 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 HEBP2Q9Y5Z4 205 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 FKBP7Q9Y680 259 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PRSS21Q9Y6M0 314 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 DNAJC13O75165 2243 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 INTS1Q8N201 2190 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 GTF3C1Q12789 2109 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ARHGAP21Q5T5U3 1957 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 NCKAP5O14513 1909 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 VWFP04275 2813 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 CSPG4Q6UVK1 2322 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF407Q9C0G0 2248 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 IGHV1-45A0A0A0MS14 117 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A1B0GUH1 482 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 GSAPA4D1B5 854 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 FBLL1A6NHQ2 334 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 RNF212BA8MTL3 300 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ARHGEF33A8MVX0 844 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 HACD1B0YJ81 288 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 H0YL77 283 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 PDLIM1O00151 329 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 CCL22O00626 93 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 SDHDO14521 159 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 EI24O14681 340 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 IMPA2O14732 288 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 MAGEB3O15480 346 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 GMFGO60234 142 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 KLHL41O60662 606 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 CST8O60676 142 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TOXO94900 526 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 AP2A1O95782 977 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 AGTP01019 485 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 SERPINA7P05543 415 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 KLK3P07288 261 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TPM2P07951 284 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ANXA4P09525 319 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 H2AFZP0C0S5 128 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ZSCAN5DPP0CG00 497 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 PSMB5P28074 263 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 PBLDP30039 288 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 CCR7P32248 378 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC26A3P40879 764 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 GBX2P52951 348 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TMEM50BP56557 158 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 DCDP81605 110 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 RELAQ04206 551 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 SRYQ05066 204 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 XRCC4Q13426 336 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 EXOSC2Q13868 293 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ITIH4Q14624 930 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TRIP10Q15642 601 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 MOGAT2Q3SYC2 334 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 UNC50Q53HI1 259 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TFDP3Q5H9I0 405 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TCHHL1Q5QJ38 904 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 CCDC122Q5T0U0 273 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ATAD3BQ5T9A4 648 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 AGAP7PQ5VUJ5 663 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 WDR25Q64LD2 544 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 DMKNQ6E0U4 476 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ASPHD2Q6ICH7 369 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 FRMPD2BQ6IN97 320 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 PRMT9Q6P2P2 845 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF562Q6V9R5 426 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 RGS9BPQ6ZS82 235 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 CENPUQ71F23 418 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 H2AFVQ71UI9 128 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 NLRP9Q7RTR0 991 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 SERPINA9Q86WD7 417 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 METTL4Q8N3J2 472 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ZADH2Q8N4Q0 377 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 CLDN19Q8N6F1 224 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF614Q8N883 585 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR2L3Q8NG85 312 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR5AU1Q8NGC0 362 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR4E2Q8NGC2 313 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR52B6Q8NGF0 335 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR52M1Q8NGK5 317 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR2A1Q8NGT9 310 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR2L8Q8NGY9 312 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 OR2T6Q8NHC8 308 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 BLOC1S5Q8TDH9 187 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 PHF10Q8WUB8 498 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TFB1MQ8WVM0 346 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 LCN9Q8WX39 176 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 PEX13Q92968 403 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.01□□□□□ -2.092e-10■■■■■ 34
SMARCB1-208ENST00000634926 C4orf36Q96KX1 117 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 IMMP1LQ96LU5 166 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 AGAP4Q96P64 663 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 RCHY1Q96PM5 261 aa2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 MYCBPQ99417 103 aaPredicted RBP2.01□□□□□ -2.09
SMARCB1-208ENST00000634926 COPS8Q99627 209 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms