RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SCAIQ8N9R8 606 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 ZNF420Q8TAQ5 688 aaPredicted RBP9.4□□□□□ -0.9
VPS11-208ENST00000621676 RBP7Q96R05 134 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 SIGLEC11Q96RL6 698 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 MROQ9BYG7 248 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 LOC100509620A0A075B734 347 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 TRIM64CA6NLI5 447 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 AQP8O94778 261 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 ANXA2P07355 339 aaKnown RBP9.4□□□□□ -0.9
VPS11-208ENST00000621676 ABOP16442 354 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 RANBP1P43487 201 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
VPS11-208ENST00000621676 MFGE8Q08431 387 aaPredicted RBP9.4□□□□□ -0.9
VPS11-208ENST00000621676 TUBA3CQ13748 450 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 KIAA2026Q5HYC2 2103 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 RNFT1Q5M7Z0 435 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 NCCRP1Q6ZVX7 275 aaPredicted RBP9.4□□□□□ -0.9
VPS11-208ENST00000621676 FAM122BQ7Z309 247 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 CNEP1R1Q8N9A8 125 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 AKR7LQ8NHP1 331 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 TMEM106AQ96A25 262 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 SCNM1Q9BWG6 230 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 HDHD2Q9H0R4 259 aa9.4□□□□□ -0.9
VPS11-208ENST00000621676 MRPL22Q9NWU5 206 aaKnown RBP9.4□□□□□ -0.9
VPS11-208ENST00000621676 EXOSC1Q9Y3B2 195 aaKnown RBP9.4□□□□□ -0.9
VPS11-208ENST00000621676 POLQO75417 2590 aa9.4□□□□□ -0.91
VPS11-208ENST00000621676 SLC22A23A1A5C7 686 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 FABP12A6NFH5 140 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 OR6C76A6NM76 312 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 OR2T1O43869 369 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 CSN2P05814 226 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 DYNC1I2Q13409 638 aaKnown RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 GALEQ14376 348 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 IRF3Q14653 427 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 LINC01590Q5TEZ4 76 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 SFRP4Q6FHJ7 346 aaPredicted RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 RNF144BQ7Z419 303 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 CARFQ8N187 725 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 JAGN1Q8N5M9 183 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 PARP16Q8N5Y8 322 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 FAM71CQ8NEG0 241 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 KBTBD8Q8NFY9 601 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 OR5H6Q8NGV6 325 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 OR10D3Q8NH80 312 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 WACQ9BTA9 647 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ABHD6Q9BV23 337 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 CRLF2Q9HC73 371 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 MRM2Q9UI43 246 aaKnown RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 CAMK2AQ9UQM7 478 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 OR5H15A6NDH6 313 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 LIPT2A6NK58 231 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ADRB1P08588 477 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 RBM34P42696 430 aaKnown RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 SOX8P57073 446 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 PPIAP62937 165 aaKnown RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 MLLT11Q13015 90 aaPredicted RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 PLA2G7Q13093 441 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 PDCD1Q15116 288 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ZNF57Q68EA5 555 aaPredicted RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 FAAP20Q6NZ36 180 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 TMPRSS12Q86WS5 348 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ZNF227Q86WZ6 799 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 GLB1L2Q8IW92 636 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 OR2AE1Q8NHA4 323 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 TRMT10AQ8TBZ6 339 aaKnown RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 C11orf40Q8WZ69 217 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ZNF552Q9H707 407 aaPredicted RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 CHST11Q9NPF2 352 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 FKBP14Q9NWM8 211 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 SHANK1Q9Y566 2161 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 TMEM269A0A1B0GVZ9 245 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 PRR33A8MZF0 331 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 B4E171 279 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ADAM10O14672 748 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 GLCEO94923 617 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 TSPAN7P41732 249 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 INPP1P49441 399 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 SRP9P49458 86 aaKnown RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 RORCP51449 518 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 GLO1Q04760 184 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ZNF528Q3MIS6 628 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 CEP78Q5JTW2 689 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 SFRP5Q5T4F7 317 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 TMPPEQ6ZT21 453 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 FCGR1BQ92637 280 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 HOXB13Q92826 284 aaPredicted RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 DVL3Q92997 716 aaPredicted RBP9.39□□□□□ -0.91
VPS11-208ENST00000621676 WDR54Q9H977 334 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 SACM1LQ9NTJ5 587 aa9.39□□□□□ -0.91
VPS11-208ENST00000621676 ZNF670-ZNF695F2Z2N8 137 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TO15178 435 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 UPK3AO75631 287 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 NEURL1O76050 574 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 HLA-DPB1P04440 258 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 SERPINA7P05543 415 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 EDN3P14138 238 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 BAK1Q16611 211 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 OR51A2Q8NGJ7 313 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 C9orf43Q8TAL5 461 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms