RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 AKIP1Q9NQ31 210 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 EXOSC3Q9NQT5 275 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 POLE3Q9NRF9 147 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TBC1D23Q9NUY8 699 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 RHBDL2Q9NX52 303 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ERVK-18Q9QC07 812 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 OSGIN1Q9UJX0 560 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 SAMD4AQ9UPU9 718 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 TMED7Q9Y3B3 224 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 A0A096LPE4 126 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 A0A1W2PPZ6 126 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TMEM72A0PK05 275 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZC3H12DA2A288 527 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZNF99A8MXY4 864 aaPredicted RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 B4DSR2 109 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 CLIC1O00299 241 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 GNGT2O14610 69 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZNF208O43345 1280 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 XPNPEP2O43895 674 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 WBP4O75554 376 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 AKR7A3O95154 331 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 VENTXO95231 258 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 LGI1O95970 557 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 IMPDH2P12268 514 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 IFNGR1P15260 489 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 EPHA2P29317 976 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TACR3P29371 465 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 OPRL1P41146 370 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 MAP2K6P52564 334 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 SCGB2A2Q13296 93 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TMED1Q13445 227 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 MAD2L1BPQ15013 274 aaPredicted RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 GPAT3Q53EU6 434 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TMEM225Q6GV28 225 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 FRRS1Q6ZNA5 592 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 VTCN1Q7Z7D3 282 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 IGFN1Q86VF2 1251 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 LSRQ86X29 649 aaPredicted RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 CENPSQ8N2Z9 138 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 MFSD4AQ8N468 514 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 OR4F15Q8NGB8 312 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 OR9K2Q8NGE7 335 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 OR4A15Q8NGL6 344 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 OR1K1Q8NGR3 316 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 SGMS2Q8NHU3 365 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 MIPOL1Q8TD10 442 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 GCDHQ92947 438 aaPredicted RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZG16BQ96DA0 208 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 SF3B5Q9BWJ5 86 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 SPATA9Q9BWV2 254 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 RAD21L1Q9H4I0 556 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 MOV10Q9HCE1 1003 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 BTNL2Q9UIR0 455 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ERGIC3Q9Y282 383 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 U3KQV3 271 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 J3QRK9 145 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 RNASET2O00584 256 aaKnown RBP6.77□□□□□ -1.33
CLK1-215ENST00000621181 AP3D1O14617 1153 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 NOL3O60936 208 aaKnown RBP6.77□□□□□ -1.33
CLK1-215ENST00000621181 E2F6O75461 281 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
CLK1-215ENST00000621181 AVPP01185 164 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 NPR2P20594 1047 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 MVDP53602 400 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 DVL1P1P54792 670 aaPredicted RBP6.77□□□□□ -1.33
CLK1-215ENST00000621181 TUBA1BP68363 451 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 IL1RL1Q01638 556 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 NPRL3Q12980 569 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 OR7A5Q15622 319 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 NPTX1Q15818 432 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 TUBA1AQ71U36 451 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 GLCCI1Q86VQ1 547 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 TSPYL5Q86VY4 417 aaPredicted RBP6.77□□□□□ -1.33
CLK1-215ENST00000621181 TMEM99Q8N816 258 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 ZIC4Q8N9L1 334 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 SETD9Q8NE22 299 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 NUP37Q8NFH4 326 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 SEMA6DQ8NFY4 1073 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 ZNF418Q8TF45 676 aaPredicted RBP6.77□□□□□ -1.33
CLK1-215ENST00000621181 APH1BQ8WW43 257 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 BOD1Q96IK1 185 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 ZNF347Q96SE7 839 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 GABARAPL3Q9BY60 117 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 SAP130Q9H0E3 1048 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 ZNF442Q9H7R0 627 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 ADPRHL2Q9NX46 363 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 BAG5Q9UL15 447 aa6.77□□□□□ -1.33
CLK1-215ENST00000621181 MEGF8Q7Z7M0 2845 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 OR6C65A6NJZ3 312 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 AQP7P3A6NL99 342 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 EVPLLA8MZ36 301 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PTGES3LE9PB15 166 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 ZNF682O95780 498 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 MT-ND2P03891 347 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 GUSBP08236 651 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 EGR1P18146 543 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CALCRP30988 508 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 FMO3P31513 532 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms