RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CDH11P55287 796 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CSNK2A1P68400 391 aaPredicted RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 BSPH1Q075Z2 132 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 SLC3A1Q07837 685 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 FLOT2Q14254 428 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 TAB1Q15750 504 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CHI3L2Q15782 390 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 OCLNQ16625 522 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 TIGD6Q17RP2 521 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 ZFP69Q49AA0 526 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 SLC9B1Q4ZJI4 515 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 TMEM201Q5SNT2 666 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 RSBN1Q5VWQ0 802 aaPredicted RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 LIPNQ5VXI9 398 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CBLN3Q6UW01 205 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 DNM1P46Q6ZS02 220 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 RRM2BQ7LG56 351 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 NUFIP2Q7Z417 695 aaKnown RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 SPATA19Q7Z5L4 167 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 P2RY8Q86VZ1 359 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 ARIH2OSQ8N7S6 290 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 ZNF781Q8N8C0 355 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 FAM71CQ8NEG0 241 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 RNASE11Q8TAA1 199 aaKnown RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 DTD1Q8TEA8 209 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 ZFP90Q8TF47 636 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 HSD17B8Q92506 261 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 HTRA1Q92743 480 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 TNFRSF14Q92956 283 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 NEURL3Q96EH8 262 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 SH3YL1Q96HL8 342 aaPredicted RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 ADAD1Q96M93 576 aaKnown RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 CCDC115Q96NT0 180 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 TNFRSF13CQ96RJ3 184 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 NPAS1Q99742 590 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 RBM4BQ9BQ04 359 aaKnown RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 TCEAL7Q9BRU2 100 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 RBM4Q9BWF3 364 aaKnown RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 RIMS4Q9H426 269 aaPredicted RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 TMEM185BQ9H7F4 350 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 MANSC1Q9H8J5 431 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 BIN3Q9NQY0 253 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 TAS2R3Q9NYW6 316 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CISD1Q9NZ45 108 aaKnown RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 KLHL13Q9P2N7 655 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 LPAR3Q9UBY5 353 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 MGAT4BQ9UQ53 548 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 B3GALT5Q9Y2C3 310 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 GRIP1Q9Y3R0 1128 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 SPIN1Q9Y657 262 aaPredicted RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 FREM1Q5H8C1 2179 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 A0A096LNT2 108 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 DPRXA6NFQ7 191 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 H3BMQ9 156 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 FAAHO00519 579 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 GYG2O15488 501 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 WIPF1O43516 503 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 KIAA0513O60268 411 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 UGT2B17O75795 530 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 NUDT14O95848 222 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 ADAP00813 363 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 THBS1P07996 1170 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 COX4I1P13073 169 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 SRD5A1P18405 259 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 TCN1P20061 433 aaPredicted RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 LAP3P28838 519 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 CD40LGP29965 261 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 SKP2Q13309 424 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 SMCO1Q147U7 214 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 TRAM2Q15035 370 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 PGS1Q32NB8 556 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 GFOD2Q3B7J2 385 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 SFRP5Q5T4F7 317 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 SAXO2Q658L1 398 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 CYB5R2Q6BCY4 276 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 OR4F3Q6IEY1 312 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 TYW3Q6IPR3 259 aaKnown RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 KLHL24Q6TFL4 600 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 Q6ZT83 130 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 FCRLAQ7L513 359 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 GABRG1Q8N1C3 465 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 EIF4E3Q8N5X7 224 aaKnown RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 GATSQ8NAP1 163 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 OR5T1Q8NG75 326 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 OR10J5Q8NHC4 309 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 MOSPD2Q8NHP6 518 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 FBXO27Q8NI29 283 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 PNPT1Q8TCS8 783 aaKnown RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 ABHD3Q8WU67 409 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 ST8SIA4Q92187 359 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 PROX1Q92786 737 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 KISS1RQ969F8 398 aaPredicted RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 MCUR1Q96AQ8 359 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 TRNT1Q96Q11 434 aaKnown RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 SF3B5Q9BWJ5 86 aaKnown RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 CACNG6Q9BXT2 260 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 METTL8Q9H825 291 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms