RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 CPED1A4D0V7 1026 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CTSLP07711 333 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CPMP14384 443 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 TYRP1P17643 537 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 METAP1P53582 386 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 P4HA3Q7Z4N8 544 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 OR5M8Q8NGP6 311 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 SFXN5Q8TD22 340 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 LAT2Q9GZY6 243 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 ZNF878C9JN71 531 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 TMEM189-UBE2V1I3L0A0 370 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 TNFSF12O43508 249 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 ZNF354AO60765 605 aaPredicted RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CLEC3AO75596 197 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 JMJD7P0C870 316 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 RNH1P13489 461 aaKnown RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 ZNF10P21506 573 aaPredicted RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 NANOS3P60323 173 aaKnown RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 SLC48A1Q6P1K1 146 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 WDR88Q6ZMY6 472 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 SYS1Q8N2H4 156 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CSNK1A1LQ8N752 337 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 OR51A4Q8NGJ6 313 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 SOCS4Q8WXH5 440 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 PMM1Q92871 262 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 RERGQ96A58 199 aaPredicted RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 POM121Q96HA1 1249 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 KIRREL1Q96J84 757 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 TMPRSS5Q9H3S3 457 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 MMP26Q9NRE1 261 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 TNFSF18Q9UNG2 199 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CCL26Q9Y258 94 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 PCYT1BQ9Y5K3 369 aaPredicted RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 SLC33A1O00400 549 aaPredicted RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 PHOX2AO14813 284 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 GATCO43716 136 aaKnown RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CTAG2O75638 210 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 GPANK1O95872 356 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 RHOP08100 348 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CLDN6P56747 220 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 CYCSP99999 105 aaKnown RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 ELOCQ15369 112 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 TMEM35AQ53FP2 167 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 PNLDC1Q8NA58 520 aaKnown RBP14.26□□□□□ -0.13
SYNRG-223ENST00000616179 OR13C3Q8NGS6 347 aa14.26□□□□□ -0.13
SYNRG-223ENST00000616179 XIRP1Q702N8 1843 aaKnown RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 DOCK1Q14185 1865 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 TMEM272A0A1B0GTI8 110 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 UMAD1C9J7I0 102 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 PRKNO60260 465 aaPredicted RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 PPP2CBP62714 309 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 PPP2CAP67775 309 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 ATPAF1Q5TC12 328 aaPredicted RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 UBAC2Q8NBM4 344 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 NRIP2Q9BQI9 281 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 ABT1Q9ULW3 272 aaKnown RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 HS3ST2Q9Y278 367 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 AMDHD2Q9Y303 409 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 HTR2CP28335 458 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 HSD17B2P37059 387 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 DIO1P49895 249 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 PRDX1Q06830 199 aaKnown RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 AWAT1Q58HT5 328 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 VN1R2Q8NFZ6 395 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 MARCH1Q8TCQ1 289 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 IRF7Q92985 503 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 CMBLQ96DG6 245 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 DTD2Q96FN9 168 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 ST6GALNAC5Q9BVH7 336 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 CRLF2Q9HC73 371 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 GAR1Q9NY12 217 aaKnown RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 WIF1Q9Y5W5 379 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 LOC100289279A0A1B0GTE1 492 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 A0A1W2PPE2 198 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 P2RX6O15547 441 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 OR2C1O95371 312 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 KLK3P07288 261 aaPredicted RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 EFNB1P98172 346 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 COL19A1Q14993 1142 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 ABHD17CQ6PCB6 329 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 COX15Q7KZN9 410 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 EIF4E3Q8N5X7 224 aaKnown RBP14.25□□□□□ -0.13
SYNRG-223ENST00000616179 SEC11CQ9BY50 192 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 EPHA6Q9UF33 1036 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 TMED7Q9Y3B3 224 aa14.25□□□□□ -0.13
SYNRG-223ENST00000616179 CYTIPO60759 359 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 C8AP07357 584 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 OR8U9P0C7N5 309 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 GLI4P10075 376 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 RBMXP38159 391 aaKnown RBP14.24□□□□□ -0.13
SYNRG-223ENST00000616179 PNLIPRP2P54317 469 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 MPPED2Q15777 294 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 C1orf189Q5VU69 101 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 GVQW1Q8N7I0 195 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 HSD17B11Q8NBQ5 300 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 PPP4R1LQ9P1A2 415 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 KCNK7Q9Y2U2 307 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 AP4M1O00189 453 aa14.24□□□□□ -0.13
SYNRG-223ENST00000616179 MT-ND4LP03901 98 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms