RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ZBTB37Q5TC79 503 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 PRAMEF9Q5VWM5 478 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 RPL3LQ92901 407 aaKnown RBP8.6□□□□□ -1.03
COL12A1-211ENST00000615798 FAM155AB1AL88 458 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-211ENST00000615798 MLLT11Q13015 90 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-211ENST00000615798 ZFAND4Q86XD8 727 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 OR5AP2Q8NGF4 316 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 TMEM37Q8WXS4 190 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 JMJD7P0C870 316 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 ACP2P11117 423 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 TNFSF4P23510 183 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 GABRR1P24046 479 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 PTPN18Q99952 460 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 FREM1Q5H8C1 2179 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 FREM3P0C091 2139 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 SLC38A8A6NNN8 435 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 OR8G1Q15617 311 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 LPPQ93052 612 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 SAMD8Q96LT4 415 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 MTCL1Q9Y4B5 1905 aaKnown RBP8.6□□□□□ -1.03
COL12A1-211ENST00000615798 NANOGP8Q6NSW7 305 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 PRSS58Q8IYP2 241 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 GABARAPL1Q9H0R8 117 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 NANOGQ9H9S0 305 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 MYOFQ9NZM1 2061 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 PAM16Q9Y3D7 125 aa8.6□□□□□ -1.03
COL12A1-211ENST00000615798 TNRC6AQ8NDV7 1962 aaKnown RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 UBL3O95164 117 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 C6orf47O95873 294 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 RPEL1Q2QD12 228 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SLC22A6Q4U2R8 563 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 UBALD2Q8IYN6 164 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 FAM186AA6NE01 2351 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 CALCBP10092 127 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ALKBH1Q13686 389 aaKnown RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 TPRG1Q6ZUI0 275 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 DMBX1Q8NFW5 382 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 OR52E2Q8NGJ4 325 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 TM6SF2Q9BZW4 377 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 OR51M1Q9H341 326 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SLC22A13Q9Y226 551 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ZNF217O75362 1048 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 TCRBP04435 133 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ATXN1LP0C7T5 689 aaKnown RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 CSNK1G2P78368 415 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ASAH1Q13510 395 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 TRILQ7L0X0 811 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ZNF761Q86XN6 746 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 GAS2L1Q99501 681 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SPO11Q9Y5K1 396 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ARNTLO00327 626 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 FAM87AP0C7U9 286 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SUB1P53999 127 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SLBPQ14493 270 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ANKRD16Q6P6B7 361 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 WDR5BQ86VZ2 330 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 OR5D14Q8NGL3 314 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 DDOQ99489 341 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 DMRT3Q9NQL9 472 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 UQCR10Q9UDW1 63 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SPATA31D3P0C874 917 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 OTX2P32243 289 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 STK19P49842 368 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 RCAN2Q14206 197 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 PRAMEF20Q5VT98 475 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 DHRS7BQ6IAN0 325 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SPATA31D4Q6ZUB0 917 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ZNF429Q86V71 674 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 TMEM231Q9H6L2 316 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 EGLN3Q9H6Z9 239 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SLC10A2Q12908 348 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 VEZF1Q14119 521 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SLC35B4Q969S0 331 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 OR52A4PA6NMU1 304 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 FUCA1P04066 466 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 LRFN4Q6PJG9 635 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 C5orf46Q6UWT4 87 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 HBEGFQ99075 208 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SMOQ99835 787 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 MENTQ9BUN1 341 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 C11orf54Q9H0W9 315 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-211ENST00000615798 PLGLB1Q02325 96 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 COX19Q49B96 90 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 MS4A13Q5J8X5 152 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 AMIGO3Q86WK7 504 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 CD200R1Q8TD46 325 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 TEPSINQ96N21 525 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 TMEM70Q9BUB7 260 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 SLC6A14Q9UN76 642 aa8.59□□□□□ -1.03
COL12A1-211ENST00000615798 ZCWPW2A0A1B0GU75 182 aa8.59□□□□□ -1.04
COL12A1-211ENST00000615798 H7BY64 318 aa8.59□□□□□ -1.04
COL12A1-211ENST00000615798 SLC6A8P48029 635 aa8.59□□□□□ -1.04
COL12A1-211ENST00000615798 GRB7Q14451 532 aa8.59□□□□□ -1.04
COL12A1-211ENST00000615798 GRM7Q14831 915 aa8.59□□□□□ -1.04
COL12A1-211ENST00000615798 Q6ZRG5 221 aa8.59□□□□□ -1.04
COL12A1-211ENST00000615798 USP53Q70EK8 1073 aa8.59□□□□□ -1.04
COL12A1-211ENST00000615798 MARF1Q9Y4F3 1742 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms