RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TPSD1Q9BZJ3 242 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 SIDT1Q9NXL6 827 aaKnown RBP8.04□□□□□ -1.12
CSMD1-216ENST00000602557 MROH6A6NGR9 719 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 GPX5O75715 221 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 PDGFBP01127 241 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-216ENST00000602557 TK1P04183 234 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 CPMP14384 443 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 HBA1P69905 142 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 ACSM1Q08AH1 577 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 SLC10A1Q14973 349 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 OR6F1Q8NGZ6 308 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 ULBP3Q9BZM4 244 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 ENKD1Q9H0I2 346 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 A0A0A6YYC8 382 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-216ENST00000602557 I3L1I5 382 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-216ENST00000602557 ZNF354AO60765 605 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-216ENST00000602557 ACAA1P09110 424 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-216ENST00000602557 DBHP09172 617 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 H2AFB1P0C5Y9 115 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 ACKR1Q16570 336 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 CXorf58Q96LI9 332 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 TREX1Q9NSU2 369 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 SLC23A2Q9UGH3 650 aa8.04□□□□□ -1.12
CSMD1-216ENST00000602557 ZNF98A6NK75 572 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CLDN1O95832 211 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 ATP1B1P05026 303 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 GCH1P30793 250 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CCR9P51686 369 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 ARL6IP1Q15041 203 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 OR1Q1Q15612 314 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 LILRB1Q8NHL6 650 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 OR2F2O95006 317 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 IGHG1P01857 330 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 OR2F1Q13607 317 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 GUK1Q16774 197 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 OR52R1Q8NGF1 315 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 THOC3Q96J01 351 aaKnown RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 SORCS2Q96PQ0 1159 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 INPP5EQ9NRR6 644 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 MED9Q9NWA0 146 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 KDM4EB2RXH2 506 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CST2P09228 141 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 FRMPD2BQ6IN97 320 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 ANKRD9Q96BM1 317 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 KLK4Q9Y5K2 254 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 PDCD11Q14690 1871 aaKnown RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 H7C1C5 153 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 LAMTOR5O43504 91 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 KIR2DL3P43628 341 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 LCN6P62502 163 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 SNRPNP63162 240 aaKnown RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 POU3F1Q03052 451 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CHRNEQ04844 493 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 OR7E24Q6IFN5 339 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CLMPQ9H6B4 373 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 DCAF16Q9NXF7 216 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 HBQ1P09105 142 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 NID1P14543 1247 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 ALKBH1Q13686 389 aaKnown RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 TMEM201Q5SNT2 666 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 VRK2Q86Y07 508 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CPEB1Q9BZB8 566 aaKnown RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 FAM234AQ9H0X4 552 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 PLEK2Q9NYT0 353 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 SCML1Q9UN30 329 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 FGF4P08620 206 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CD1EP15812 388 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 RPA2P15927 270 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CEBPBP17676 345 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 TNFSF4P23510 183 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 OR6T1Q8NGN1 323 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 SLC35D1Q9NTN3 355 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 RNASEK-C17orf49H0YIS7 233 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 SLC16A7O60669 478 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 MTNR1BP49286 362 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 VEZF1Q14119 521 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 Q6ZN92 141 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 UCN3Q969E3 161 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 PHYHIPLQ96FC7 376 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 NUDT22Q9BRQ3 303 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 PRSS21Q9Y6M0 314 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 ACOT8O14734 319 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 TMEM11P17152 192 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 EMP2P54851 167 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 AADACL3Q5VUY0 350 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 FOXJ1Q92949 421 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 UPRTQ96BW1 309 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 RHOFQ9HBH0 211 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 SUSD2Q9UGT4 822 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 A0A087WUU8 490 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 PLSCR5A0PG75 271 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 RNLSQ5VYX0 342 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 C17orf78Q8N4C9 275 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 SECTM1Q8WVN6 248 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 MCTS1Q9ULC4 181 aaKnown RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 CBLCQ9ULV8 474 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 NENFQ9UMX5 172 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 NPFFR2Q9Y5X5 522 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms