RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 SNX32Q86XE0 403 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 PAPD5Q8NDF8 572 aaKnown RBP11.79□□□□□ -0.52
TRIM11-205ENST00000602308 OR6N1Q8NGY5 312 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 MIPOL1Q8TD10 442 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 FMO2Q99518 471 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 CITED2Q99967 270 aaPredicted RBP11.79□□□□□ -0.52
TRIM11-205ENST00000602308 SLC19A3Q9BZV2 496 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 LRMDAQ9H2I8 198 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 A4GALTQ9NPC4 353 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 RLIMQ9NVW2 624 aa11.79□□□□□ -0.52
TRIM11-205ENST00000602308 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
TRIM11-205ENST00000602308 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
TRIM11-205ENST00000602308 SLC28A1O00337 649 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 AIM2O14862 343 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 INHBAP08476 426 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
TRIM11-205ENST00000602308 CALCOCO2Q13137 446 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 RUNDC3AQ59EK9 446 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 XKR7Q5GH72 579 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 ZMAT1Q5H9K5 638 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 MTX3Q5HYI7 312 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 ATAD3BQ5T9A4 648 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 WBP2NLQ6ICG8 309 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 TMEM53Q6P2H8 277 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 LYPD2Q6UXB3 125 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 WDR88Q6ZMY6 472 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 UEVLDQ8IX04 471 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 SPERTQ8NA61 448 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 TMEM109Q9BVC6 243 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
TRIM11-205ENST00000602308 A0A096LPI6 279 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 RNF103-CHMP3A0A140T963 221 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 PHYHO14832 338 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 CRCPO75575 148 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 CYB5R3P00387 301 aaPredicted RBP11.77□□□□□ -0.53
TRIM11-205ENST00000602308 PTHP01270 115 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 OPN1SWP03999 348 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 FAM153BP0C7A2 387 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 GRPRP30550 384 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 ZNF404Q494X3 552 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 GPAT3Q53EU6 434 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 ZDHHC24Q6UX98 284 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 Q6ZR03 302 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 H1FNTQ75WM6 255 aaPredicted RBP11.77□□□□□ -0.53
TRIM11-205ENST00000602308 NLRC3Q7RTR2 1065 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 SLC22A9Q8IVM8 553 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 CCNYL1Q8N7R7 359 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 OR2Z1Q8NG97 314 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 OR2T6Q8NHC8 308 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 ZNF420Q8TAQ5 688 aaPredicted RBP11.77□□□□□ -0.53
TRIM11-205ENST00000602308 TAAR8Q969N4 342 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 COQ8BQ96D53 544 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 GCM1Q9NP62 436 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 TMEM38BQ9NVV0 291 aa11.77□□□□□ -0.53
TRIM11-205ENST00000602308 PLECQ15149 4684 aaKnown RBP11.76□□□□□ -0.53
TRIM11-205ENST00000602308 IQCMA0A1B0GVH7 501 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 HMGB1P1B2RPK0 211 aaPredicted RBP11.76□□□□□ -0.53
TRIM11-205ENST00000602308 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
TRIM11-205ENST00000602308 AGR2O95994 175 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 FBP1P09467 338 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 RPS4Y1P22090 263 aaKnown RBP11.76□□□□□ -0.53
TRIM11-205ENST00000602308 CBLP22681 906 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 MAPK1P28482 360 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 ARRB2P32121 409 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 APLNRP35414 380 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 DCTN2Q13561 401 aaKnown RBP11.76□□□□□ -0.53
TRIM11-205ENST00000602308 GALNTL6Q49A17 601 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 FAM201AQ5SY85 155 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 ADAMTSL5Q6ZMM2 481 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 RFPL4BQ6ZWI9 263 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 CALHM3Q86XJ0 350 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 PTOV1Q86YD1 416 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 CLECL1Q8IZS7 167 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 KRTCAP2Q8N6L1 136 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 IFT81Q8WYA0 676 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 RCC1LQ96I51 464 aaKnown RBP11.76□□□□□ -0.53
TRIM11-205ENST00000602308 ZIM3Q96PE6 472 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 SLC38A1Q9H2H9 487 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 TUBB1Q9H4B7 451 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 PALMDQ9NP74 551 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 NOP53Q9NZM5 478 aaKnown RBP11.76□□□□□ -0.53
TRIM11-205ENST00000602308 IL19Q9UHD0 177 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 TMED5Q9Y3A6 229 aa11.76□□□□□ -0.53
TRIM11-205ENST00000602308 ZNF726A6NNF4 738 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 NPHS1O60500 1241 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 ZFPL1O95159 310 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 LIPFP07098 398 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 GSTA1P08263 222 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 PRG2P13727 222 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 TNFSF4P23510 183 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 LMO1P25800 156 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 RPL3P39023 403 aaKnown RBP11.75□□□□□ -0.53
TRIM11-205ENST00000602308 CSNK1A1P48729 337 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 COPZ1P61923 177 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 SLC35A2P78381 396 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 PLP2Q04941 152 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 PSG7Q13046 419 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 PTGR1Q14914 329 aa11.75□□□□□ -0.53
TRIM11-205ENST00000602308 AGBL2Q5U5Z8 902 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms