RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 METTL27Q8N6F8 245 aaPredicted RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 ACBD4Q8NC06 268 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 CMTM3Q96MX0 182 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 FAM96BQ9Y3D0 163 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 TBC1D3DA0A087WVF3 549 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 TBC1D3IA0A087WXS9 549 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 A0A0B4J2A0 478 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 TBC1D3LB9A6J9 549 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 H0YGG7 62 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 SULT1C2O00338 296 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 GPR75O95800 540 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 TBC1D3HP0C7X1 549 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 AKR1C4P17516 323 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 ADCYAP1P18509 176 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 MAOBP27338 520 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 AKR1C3P42330 323 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 GRK6P43250 576 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 ARF3P61204 181 aaPredicted RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 RPS15AP62244 130 aaKnown RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 PLEKHN1Q494U1 663 aaPredicted RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 TBC1D3CQ6IPX1 549 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 ENPP7Q6UWV6 458 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 DPY19L2P2Q6ZN68 376 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 TBC1D3Q8IZP1 549 aaPredicted RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 JAGN1Q8N5M9 183 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 FAM46BQ96A09 425 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 NKX2-4Q9H2Z4 354 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 BARX1Q9HBU1 254 aaPredicted RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 OR2S2Q9NQN1 319 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 SHPKQ9UHJ6 478 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 C5orf51A6NDU8 294 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 C17orf51A8MQB3 221 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 WNT11O96014 354 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 IGFALSP35858 605 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 KIR2DL1P43626 348 aaPredicted RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 B2MP61769 119 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 ENPP2Q13822 863 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 EIF2B1Q14232 305 aaKnown RBP16.61■□□□□ 0.25
UPF1-210ENST00000600689 RAB11BQ15907 218 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 ITPRIPL2Q3MIP1 535 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 TMEM31Q5JXX7 168 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 ANKRD16Q6P6B7 361 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 PRSS35Q8N3Z0 413 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 FAM174AQ8TBP5 190 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 GPR148Q8TDV2 347 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 CMBLQ96DG6 245 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 OR2A5Q96R48 311 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 SLC17A9Q9BYT1 436 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 PRR13Q9NZ81 148 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 ETV7Q9Y603 341 aa16.61■□□□□ 0.25
UPF1-210ENST00000600689 MAPK3P27361 379 aaPredicted RBP16.6■□□□□ 0.25
UPF1-210ENST00000600689 PPM1FP49593 454 aaPredicted RBP16.6■□□□□ 0.25
UPF1-210ENST00000600689 ADPRHP54922 357 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 SPOCK1Q08629 439 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 MOGAT2Q3SYC2 334 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 ATPAF1Q5TC12 328 aaPredicted RBP16.6■□□□□ 0.25
UPF1-210ENST00000600689 OR52W1Q6IF63 320 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 H3F3CQ6NXT2 135 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 FIGLAQ6QHK4 219 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 CLEC1AQ8NC01 280 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 ZBTB8AQ96BR9 441 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 FBXO17Q96EF6 278 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 KLHDC3Q9BQ90 382 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 UTP23Q9BRU9 249 aaKnown RBP16.6■□□□□ 0.25
UPF1-210ENST00000600689 CRB3Q9BUF7 120 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 MBD2Q9UBB5 411 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 GPN3Q9UHW5 284 aaPredicted RBP16.6■□□□□ 0.25
UPF1-210ENST00000600689 CPED1A4D0V7 1026 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 POM121BA6NF01 834 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 OR4C45A6NMZ5 311 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 HCRTR1O43613 425 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 ADH1BP00325 375 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 MAP3K8P41279 467 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 GPR85P60893 370 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 GGTLC2Q14390 218 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 RBM39Q14498 530 aaKnown RBP16.6■□□□□ 0.25
UPF1-210ENST00000600689 CDNFQ49AH0 187 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 ALG10Q5BKT4 473 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 WDR38Q5JTN6 314 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 GLYATL3Q5SZD4 288 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 RCBTB1Q8NDN9 531 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 OR10R2Q8NGX6 335 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 TMED6Q8WW62 240 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 TLNRD1Q9H1K6 362 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 TAS2R8Q9NYW2 309 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 EDARQ9UNE0 448 aa16.6■□□□□ 0.25
UPF1-210ENST00000600689 SOX1O00570 391 aaPredicted RBP16.59■□□□□ 0.25
UPF1-210ENST00000600689 SPP1P10451 314 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 NPBWR1P48145 328 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 TMEM196Q5HYL7 178 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 SAMD14Q8IZD0 417 aaPredicted RBP16.59■□□□□ 0.25
UPF1-210ENST00000600689 SDR16C5Q8N3Y7 309 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 FRMD1Q8N878 549 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 CHST4Q8NCG5 386 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 OR9A4Q8NGU2 314 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 CCDC107Q8WV48 283 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 FAM3CQ92520 227 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 RERGQ96A58 199 aaPredicted RBP16.59■□□□□ 0.25
UPF1-210ENST00000600689 IFT22Q9H7X7 185 aa16.59■□□□□ 0.25
UPF1-210ENST00000600689 ELOVL3Q9HB03 270 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms