RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 RMND5AQ9H871 391 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 SAP30LQ9HAJ7 183 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 PATZ1Q9HBE1 687 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 TMEM27Q9HBJ8 222 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 CDH20Q9HBT6 801 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MEPEQ9NQ76 525 aaPredicted RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 DECR2Q9NUI1 292 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 THAP1Q9NVV9 213 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 VAPAQ9P0L0 249 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ARMCX1Q9P291 453 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 TESQ9UGI8 421 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 EGFL7Q9UHF1 273 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 PURGQ9UJV8 347 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 TRIM33Q9UPN9 1127 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 UGT2A1Q9Y4X1 527 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MMP24Q9Y5R2 645 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 INSIG2Q9Y5U4 225 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 NPTNQ9Y639 398 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 NBEAL2Q6ZNJ1 2754 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 TRPC5OSA6NMA1 111 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 A8MXK9 166 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 M0R3H8 397 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 UBDO15205 165 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 CHP2O43745 196 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 TRMUO75648 421 aaKnown RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 SERPINI2O75830 405 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 FARS2O95363 451 aaKnown RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 CH25HO95992 272 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 PLATP00750 562 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 NGFP01138 241 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 PTHP01270 115 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 IGHMP01871 453 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 WNT2P09544 360 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 SBK2P0C263 348 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 IGHV4-38-2P0DP08 117 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 KITP10721 976 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 MDKP21741 143 aaPredicted RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 GCH1P30793 250 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 ATP4BP51164 291 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 UGT2B15P54855 530 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 RGS8P57771 180 aaPredicted RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 KRTAP10-3P60369 221 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 MRPS34P82930 218 aaKnown RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 PSG4Q00888 419 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 GLO1Q04760 184 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 BAMBIQ13145 260 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 TBC1D28Q2M2D7 210 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 ZNF718Q3SXZ3 478 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 KRT71Q3SY84 523 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 SLC36A2Q495M3 483 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 TMEM155Q4W5P6 130 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 MIDNQ504T8 468 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 PABPC1L2AQ5JQF8 200 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 C6orf10Q5SRN2 563 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 SPATA46Q5T0L3 261 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 C10orf128Q5T292 105 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 ARMC4Q5T2S8 1044 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 GCNT6Q5T4J0 391 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 ZNF613Q6PF04 617 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 SLC25A47Q6Q0C1 308 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 BLOC1S3Q6QNY0 202 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 DLEU7Q6UYE1 221 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 Q6ZR03 302 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 RHOUQ7L0Q8 258 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 ZNF771Q7L3S4 317 aaPredicted RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 PTOV1Q86YD1 416 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 MREGQ8N565 214 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 C10orf53Q8N6V4 93 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 ZNF283Q8N7M2 679 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 RBM15BQ8NDT2 890 aaKnown RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 OR6T1Q8NGN1 323 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 OR1J2Q8NGS2 313 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 SLC25A40Q8TBP6 338 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 IPCEF1Q8WWN9 437 aaPredicted RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 GEMIN6Q8WXD5 167 aaKnown RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 SIGLEC11Q96RL6 698 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 MCHR1Q99705 422 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 GAL3ST1Q99999 423 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 SPATA5L1Q9BVQ7 753 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 OR2J1Q9GZK6 312 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 RAD21L1Q9H4I0 556 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 RNF121Q9H920 327 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 ZMAT3Q9HA38 289 aaKnown RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 SIAEQ9HAT2 523 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 CACYBPQ9HB71 228 aaKnown RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 SLCO1B3Q9NPD5 702 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 UBAP1Q9NZ09 502 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 PDP1Q9P0J1 537 aaPredicted RBP5.14□□□□□ -1.59
VRK3-220ENST00000600259 AUP1Q9Y679 476 aa5.14□□□□□ -1.59
VRK3-220ENST00000600259 IQCMA0A1B0GVH7 501 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 PRORSD1PA6NEY8 169 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 CENPBD1B2RD01 187 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 C5orf58C9J3I9 102 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 M0QX08 132 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 RGS16O15492 202 aaPredicted RBP5.13□□□□□ -1.59
VRK3-220ENST00000600259 TPD52L2O43399 206 aaKnown RBP5.13□□□□□ -1.59
VRK3-220ENST00000600259 RNF13O43567 381 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ENTPD5O75356 428 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 OR6A2O95222 327 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 MT-ND5P03915 603 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms