RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 OAFQ86UD1 273 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 ENTHD1Q8IYW4 607 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 MUC15Q8N387 334 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 C10orf53Q8N6V4 93 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 OR2T33Q8NG76 320 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 OR8J1Q8NGP2 316 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 PFN4Q8NHR9 129 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 CNIH3Q8TBE1 160 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 FBLIM1Q8WUP2 373 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 IPCEF1Q8WWN9 437 aaPredicted RBP11.97□□□□□ -0.49
IRF3-225ENST00000600022 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
IRF3-225ENST00000600022 TSSK6Q9BXA6 273 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 SLC25A19Q9HC21 320 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 CBLN4Q9NTU7 201 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 OSGIN1Q9UJX0 560 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 POU2F3Q9UKI9 436 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 IGKV3D-15A0A087WSY6 115 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 CIB4A0PJX0 185 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 E9PQ18 207 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 SLC1A7O00341 560 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 MRPS14O60783 128 aaKnown RBP11.96□□□□□ -0.49
IRF3-225ENST00000600022 HIST1H2ABP04908 130 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 IGHV4-31P0DP07 118 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 TFPIP10646 304 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 CRHBPP24387 322 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 RPL5P46777 297 aaKnown RBP11.96□□□□□ -0.49
IRF3-225ENST00000600022 GIPRP48546 466 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 LOXL1Q08397 574 aaPredicted RBP11.96□□□□□ -0.49
IRF3-225ENST00000600022 RAB35Q15286 201 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 SNAPC1Q16533 368 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 SYT14P1Q58G82 188 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 MEDAGQ5VYS4 303 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 C12orf73Q69YU5 71 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 ABLIM2Q6H8Q1 611 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 C3orf33Q6P1S2 294 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 SMARCD3Q6STE5 483 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 CLEC2AQ6UVW9 174 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 ZNF620Q6ZNG0 422 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 HIST3H2AQ7L7L0 130 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 P2RY8Q86VZ1 359 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 RHOXF1Q8NHV9 184 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 C10orf105Q8TEF2 133 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 HIST1H2ACQ93077 130 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 MYDGFQ969H8 173 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 ADAD1Q96M93 576 aaKnown RBP11.96□□□□□ -0.49
IRF3-225ENST00000600022 GPA33Q99795 319 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 BEX2Q9BXY8 128 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 MEPEQ9NQ76 525 aaPredicted RBP11.96□□□□□ -0.49
IRF3-225ENST00000600022 C20orf141Q9NUB4 165 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 FAIMQ9NVQ4 179 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 IL20Q9NYY1 176 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 TVP23BQ9NYZ1 205 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 NDUFA13Q9P0J0 144 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 BAIAP2Q9UQB8 552 aa11.96□□□□□ -0.49
IRF3-225ENST00000600022 NOSIPQ9Y314 301 aaKnown RBP11.96□□□□□ -0.49
IRF3-225ENST00000600022 MALRD1Q5VYJ5 2156 aa11.96□□□□□ -0.5
IRF3-225ENST00000600022 TMED7-TICAM2A0A0A6YYA0 188 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 ZNF16P17020 682 aaPredicted RBP11.95□□□□□ -0.5
IRF3-225ENST00000600022 FMO3P31513 532 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 SLC6A6P31641 620 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 MAP2K6P52564 334 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 GTF2A1P52655 376 aaPredicted RBP11.95□□□□□ -0.5
IRF3-225ENST00000600022 SNRPGP62308 76 aaKnown RBP11.95□□□□□ -0.5
IRF3-225ENST00000600022 CDK5Q00535 292 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 MST1LQ2TV78 715 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 ANKDD1AQ495B1 522 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 TMEM236Q5W0B7 351 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 ZNF773Q6PK81 442 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 MEX3DQ86XN8 651 aaKnown RBP11.95□□□□□ -0.5
IRF3-225ENST00000600022 ADGRG3Q86Y34 549 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 FBXL14Q8N1E6 418 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 SVOPQ8N4V2 548 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 ZNF540Q8NDQ6 660 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 APH1AQ96BI3 265 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 CCDC90BQ9GZT6 254 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 EGLN3Q9H6Z9 239 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 CDC42EP3Q9UKI2 254 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 TMED7Q9Y3B3 224 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 SPIN1Q9Y657 262 aaPredicted RBP11.95□□□□□ -0.5
IRF3-225ENST00000600022 ATP23Q9Y6H3 246 aa11.95□□□□□ -0.5
IRF3-225ENST00000600022 IRGMA1A4Y4 181 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 PTGES3LE9PB15 166 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 NPIPB7O75200 414 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 OR7A10O76100 309 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 IFNGP01579 166 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 SMIM18P0DKX4 95 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 MAKP20794 623 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 PTAFRP25105 342 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 APOBEC1P41238 236 aaKnown RBP11.94□□□□□ -0.5
IRF3-225ENST00000600022 EGR4Q05215 589 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 APOFQ13790 326 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 ZBED5Q49AG3 693 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 CLEC12AQ5QGZ9 265 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 CYB5R2Q6BCY4 276 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 IQCF1Q8N6M8 205 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 STK35Q8TDR2 534 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 LIPHQ8WWY8 451 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 FAM168AQ92567 244 aa11.94□□□□□ -0.5
IRF3-225ENST00000600022 RFKQ969G6 155 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms