RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PLCE1Q9P212 2302 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 IGHV1-18A0A0C4DH31 117 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 ZNF503-AS2A6NEH8 195 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 H3BN98 237 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 RAB36O95755 333 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 IGFBP1P08833 259 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 HIST1H1CP16403 213 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 ARR3P36575 388 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 CDKN2AP42771 156 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 C3orf36Q3SXR2 165 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 SLC35F1Q5T1Q4 408 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 ZFP1Q6P2D0 407 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 SLC22A25Q6T423 547 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 SLC16A14Q7RTX9 510 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 HIPK1Q86Z02 1210 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 LRRC18Q8N456 261 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 FAM169BQ8N8A8 192 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 AKAP1Q92667 903 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 RADILQ96JH8 1075 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 LIME1Q9H400 295 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 RNF121Q9H920 327 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 SIAEQ9HAT2 523 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 B3GNT2Q9NY97 397 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 CRNNQ9UBG3 495 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 POU2F3Q9UKI9 436 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 BAIAP2Q9UQB8 552 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 PDZD2O15018 2839 aa17.13■□□□□ 0.33
SHKBP1-214ENST00000597396 CSMD2Q7Z408 3487 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 BHLHE40O14503 412 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 MGRN1O60291 552 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 SLC16A7O60669 478 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 KHDRBS3O75525 346 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 IGKV3-15P01624 115 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 CTLA4P16410 223 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 ZNF23P17027 643 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 PTDSS1P48651 473 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 CDH11P55287 796 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 RAB1AP62820 205 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 SPOCK1Q08629 439 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 ZSCAN26Q16670 478 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 SLC36A2Q495M3 483 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 SLC36A3Q495N2 470 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 TMEM53Q6P2H8 277 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 DNM1P34Q6PK57 102 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 DPPA2Q7Z7J5 298 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 SDR9C7Q8NEX9 313 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 OR2T33Q8NG76 320 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 OR52E2Q8NGJ4 325 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 SNX18Q96RF0 628 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 NMNAT3Q96T66 252 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 ZNF224Q9NZL3 707 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 POLQO75417 2590 aa17.12■□□□□ 0.33
SHKBP1-214ENST00000597396 G3V2T6 193 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 HS3ST1O14792 307 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 IGLV1-44P01699 117 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 CRYAAP02489 173 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 TP53P04637 393 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 CELA3BP08861 270 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 CECR9P0C854 216 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 PATE4P0C8F1 98 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 POU1F1P28069 291 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 CRABP1P29762 137 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 GIPRP48546 466 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 ETFDHQ16134 617 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 PAMR1Q6UXH9 720 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 ZDHHC13Q8IUH4 622 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 LNX2Q8N448 690 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 FGFBP3Q8TAT2 258 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 DNAJC9Q8WXX5 260 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 NEUROG1Q92886 237 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 NABP1Q96AH0 204 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 CENPNQ96H22 339 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 NUAK2Q9H093 628 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 SEMA6AQ9H2E6 1030 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 NOX3Q9HBY0 568 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 CCNB1IP1Q9NPC3 277 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 REV1Q9UBZ9 1251 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 ST6GALNAC2Q9UJ37 374 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 FBXL3Q9UKT7 428 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 PLEKHA6Q9Y2H5 1048 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 CCDC168Q8NDH2 2452 aa17.11■□□□□ 0.33
SHKBP1-214ENST00000597396 TACC2O95359 2948 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 SHISA9B4DS77 424 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 OSMP13725 252 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 MSR1P21757 451 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 DNASE1P24855 282 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 CENPAP49450 140 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 NAAAQ02083 359 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 KEAP1Q14145 624 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 ZNF672Q499Z4 452 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 C20orf204Q6ZNR8 217 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 FOXL2NBQ6ZUU3 175 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 SVOPLQ8N434 492 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 ICA1LQ8NDH6 482 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 OR4Q3Q8NH05 313 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 FBXW5Q969U6 566 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 FOXN4Q96NZ1 517 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 RPRD1BQ9NQG5 326 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 KLHL21Q9UJP4 597 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms