RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 LMX1BO60663 402 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 RP2O75695 350 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 OR6A2O95222 327 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 NPPAP01160 153 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 IGF2P01344 180 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 CSF3P09919 207 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 FAM157CP0CG43 387 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 OR8G3PP0DMU2 310 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 UMPSP11172 480 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 NAT2P11245 290 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 NCK1P16333 377 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 PAX7P23759 505 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 APEX1P27695 318 aaKnown RBP8.97□□□□□ -0.97
LIG1-213ENST00000596672 MSX2P35548 267 aaPredicted RBP8.97□□□□□ -0.97
LIG1-213ENST00000596672 RBM34P42696 430 aaKnown RBP8.97□□□□□ -0.97
LIG1-213ENST00000596672 GSK3BP49841 420 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 TAS2R41P59536 307 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 ALKBH6Q3KRA9 238 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 KRTAP24-1Q3LI83 254 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 CHRFAM7AQ494W8 412 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 C10orf128Q5T292 105 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 ERICH5Q6P6B1 374 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 PGM2L1Q6PCE3 622 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 ZNF101Q8IZC7 436 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 LRRC18Q8N456 261 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 RNF148Q8N7C7 305 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 FAM86B1Q8N7N1 296 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 IL17RDQ8NFM7 739 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 ZNF519Q8TB69 540 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 C1orf159Q96HA4 380 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 TPD52L3Q96J77 140 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 PIMREGQ9BSJ6 248 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 DENND2DQ9H6A0 471 aaPredicted RBP8.97□□□□□ -0.97
LIG1-213ENST00000596672 B3GAT2Q9NPZ5 323 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 INIPQ9NRY2 104 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 TMEM160Q9NX00 188 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 BAG5Q9UL15 447 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 ZNF346Q9UL40 294 aaKnown RBP8.97□□□□□ -0.97
LIG1-213ENST00000596672 PRPF19Q9UMS4 504 aaKnown RBP8.97□□□□□ -0.97
LIG1-213ENST00000596672 HIF3AQ9Y2N7 669 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 CMAHPQ9Y471 501 aa8.97□□□□□ -0.97
LIG1-213ENST00000596672 IGLV3-9A0A075B6K5 115 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 TRAV27A0A087WT01 109 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 LOC100289279A0A1B0GTE1 492 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 ELOVL7A1L3X0 281 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 FAM157AC9JC47 383 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 H7C1C5 153 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 NDUFS8O00217 210 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 PHF1O43189 567 aaPredicted RBP8.96□□□□□ -0.98
LIG1-213ENST00000596672 SYNGR3O43761 229 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 UBL3O95164 117 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 IGHG1P01857 330 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 BMP4P12644 408 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 IFI30P13284 250 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 APEHP13798 732 aaKnown RBP8.96□□□□□ -0.98
LIG1-213ENST00000596672 MAGEB1P43366 347 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 EVX1P49640 407 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 SLC7A2P52569 658 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 FXYD6P3P58550 94 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 LCN6P62502 163 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 KPNB1Q14974 876 aaKnown RBP8.96□□□□□ -0.98
LIG1-213ENST00000596672 SNCBQ16143 134 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 PABPC1L2AQ5JQF8 200 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 FAM120AOSQ5T036 256 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 UGT2A3Q6UWM9 527 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 CBLL1Q75N03 491 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 NRMQ8IXM6 262 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 SLC30A7Q8NEW0 376 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 OR13C2Q8NGS9 318 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 OR51A7Q8NH64 312 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 AKR7LQ8NHP1 331 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 UBASH3BQ8TF42 649 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 NEU4Q8WWR8 484 aaPredicted RBP8.96□□□□□ -0.98
LIG1-213ENST00000596672 NSMAFQ92636 917 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 CCDC124Q96CT7 223 aaKnown RBP8.96□□□□□ -0.98
LIG1-213ENST00000596672 BPIFA2Q96DR5 249 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 PRRC1Q96M27 445 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 SNX18Q96RF0 628 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 GPA33Q99795 319 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 SH3GL1Q99961 368 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 HOPXQ9BPY8 73 aaPredicted RBP8.96□□□□□ -0.98
LIG1-213ENST00000596672 RAB1BQ9H0U4 201 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 WNT5BQ9H1J7 359 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 TXNIPQ9H3M7 391 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 CHODLQ9H9P2 273 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 SLC7A8Q9UHI5 535 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 FKBP7Q9Y680 259 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 CACNG2Q9Y698 323 aa8.96□□□□□ -0.98
LIG1-213ENST00000596672 MCIDASD6RGH6 385 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 CXCR6O00574 342 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 ENTPD5O75356 428 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 RAB36O95755 333 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 NGFP01138 241 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 HIST1H2ABP04908 130 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 THRBP10828 461 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 ZNF250P15622 560 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 ZNF32P17041 273 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 MPV17P39210 176 aa8.95□□□□□ -0.98
LIG1-213ENST00000596672 GZMKP49863 264 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms