RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 DAPL1A0PJW8 107 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 C12orf71A8MTZ7 269 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 FAM171A2A8MVW0 826 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 TFP02787 698 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 MRPL3P09001 348 aaKnown RBP11.94□□□□□ -0.5
VMP1-217ENST00000593168 PSMB9P28065 219 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 PTGS2P35354 604 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 ZNF133P52736 654 aaPredicted RBP11.94□□□□□ -0.5
VMP1-217ENST00000593168 CLRN1P58418 232 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 HSF2Q03933 536 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 GLO1Q04760 184 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 RASGEF1BQ0VAM2 473 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 CAMK2DQ13557 499 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 SPHARQ15513 63 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 MED22Q15528 200 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 TIGD6Q17RP2 521 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 LHFPL3Q86UP9 236 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 EGFL6Q8IUX8 553 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 SLC35F2Q8IXU6 374 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 TIGD4Q8IY51 512 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 CISD2Q8N5K1 135 aaKnown RBP11.94□□□□□ -0.5
VMP1-217ENST00000593168 ZNF511Q8NB15 262 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 SYT14Q8NB59 555 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 OR10H4Q8NGA5 316 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 OR52N1Q8NH53 320 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 RNF128Q8TEB7 428 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 DGCR14Q96DF8 476 aaKnown RBP11.94□□□□□ -0.5
VMP1-217ENST00000593168 OR2M2Q96R28 347 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 OR5M11Q96RB7 305 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 MYCBPQ99417 103 aaPredicted RBP11.94□□□□□ -0.5
VMP1-217ENST00000593168 MNTQ99583 582 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 YIPF3Q9GZM5 350 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 PRDM14Q9GZV8 571 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 RBM38Q9H0Z9 239 aaKnown RBP11.94□□□□□ -0.5
VMP1-217ENST00000593168 RERGLQ9H628 205 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 ISYNA1Q9NPH2 558 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 KLHL9Q9P2J3 617 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 CAB39Q9Y376 341 aaPredicted RBP11.94□□□□□ -0.5
VMP1-217ENST00000593168 CEPT1Q9Y6K0 416 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 FBN2P35556 2912 aa11.94□□□□□ -0.5
VMP1-217ENST00000593168 OR14I1A6ND48 311 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 H3BSA7 217 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 GPR171O14626 319 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 PRF1P14222 555 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 NAA10P41227 235 aaPredicted RBP11.93□□□□□ -0.5
VMP1-217ENST00000593168 CAPZA2P47755 286 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 WNT4P56705 351 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 FMODQ06828 376 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 GALEQ14376 348 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 RNPS1Q15287 305 aaKnown RBP11.93□□□□□ -0.5
VMP1-217ENST00000593168 ETFDHQ16134 617 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 SLC25A47Q6Q0C1 308 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 TMPRSS11AQ6ZMR5 421 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 KLHL36Q8N4N3 616 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 ZNF485Q8NCK3 441 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 TMEM54Q969K7 222 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 MCHR2Q969V1 340 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 TMEM45BQ96B21 275 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 MGLLQ99685 303 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 ALG8Q9BVK2 526 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 PRRG4Q9BZD6 226 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 GP6Q9HCN6 339 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 GLTPQ9NZD2 209 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 ING1Q9UK53 422 aaPredicted RBP11.93□□□□□ -0.5
VMP1-217ENST00000593168 CAMK2AQ9UQM7 478 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 COA3Q9Y2R0 106 aaPredicted RBP11.93□□□□□ -0.5
VMP1-217ENST00000593168 ZNF175Q9Y473 711 aa11.93□□□□□ -0.5
VMP1-217ENST00000593168 TVP23AA6NH52 213 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ZNF724A8MTY0 619 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ZNF701M0R085 212 aaPredicted RBP11.92□□□□□ -0.5
VMP1-217ENST00000593168 SELENOFO60613 162 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 HRGP04196 525 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 SCG5P05408 212 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 CSNK1A1P48729 337 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ZNF85Q03923 595 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ACSM1Q08AH1 577 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 MLLT11Q13015 90 aaPredicted RBP11.92□□□□□ -0.5
VMP1-217ENST00000593168 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ARMCX4Q5H9R4 360 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 TEX30Q5JUR7 227 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 OR2G6Q5TZ20 316 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 FOXB2Q5VYV0 432 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ZNF322Q6U7Q0 402 aaPredicted RBP11.92□□□□□ -0.5
VMP1-217ENST00000593168 AAED1Q7RTV5 226 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ADGRE4PQ86SQ3 457 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ERI1Q8IV48 349 aaKnown RBP11.92□□□□□ -0.5
VMP1-217ENST00000593168 GLB1L2Q8IW92 636 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 C20orf196Q8IYI0 205 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 TMEM123Q8N131 208 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 OR6N1Q8NGY5 312 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 FNDC9Q8TBE3 224 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 ABHD3Q8WU67 409 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 YIPF6Q96EC8 236 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 MRPL48Q96GC5 212 aaKnown RBP11.92□□□□□ -0.5
VMP1-217ENST00000593168 INTS14Q96SY0 518 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 BCO1Q9HAY6 547 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 MRPL22Q9NWU5 206 aaKnown RBP11.92□□□□□ -0.5
VMP1-217ENST00000593168 EMC3Q9P0I2 261 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 FOXD3Q9UJU5 478 aaPredicted RBP11.92□□□□□ -0.5
VMP1-217ENST00000593168 TMEM14AQ9Y6G1 99 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms