RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 NPIPA1Q9UND3 350 aa17.68■□□□□ 0.42
MBD3-209ENST00000592012 TRABD2BA6NFA1 517 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 H3BSH0 61 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 CCL4P13236 92 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 PTGS2P35354 604 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 HOXD12P35452 270 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 DAP3P51398 398 aaKnown RBP17.67■□□□□ 0.42
MBD3-209ENST00000592012 DUSP3P51452 185 aaPredicted RBP17.67■□□□□ 0.42
MBD3-209ENST00000592012 HSF1Q00613 529 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 TRA2AQ13595 282 aaKnown RBP eCLIP17.67■□□□□ 0.42
MBD3-209ENST00000592012 BTBD16Q32M84 506 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 RNASE12Q5GAN4 147 aaKnown RBP17.67■□□□□ 0.42
MBD3-209ENST00000592012 KCTD18Q6PI47 426 aaPredicted RBP17.67■□□□□ 0.42
MBD3-209ENST00000592012 UTS2BQ765I0 119 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 EML6Q6ZMW3 1958 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 CALCBP10092 127 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 ARSBP15848 533 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 POU3F1Q03052 451 aaPredicted RBP17.67■□□□□ 0.42
MBD3-209ENST00000592012 FMODQ06828 376 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 KRT77Q7Z794 578 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 SIAH3Q8IW03 269 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 DNAAF1Q8NEP3 725 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 BEX2Q9BXY8 128 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 FANCFQ9NPI8 374 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 MED29Q9NX70 200 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 RABL2AQ9UBK7 228 aaPredicted RBP17.67■□□□□ 0.42
MBD3-209ENST00000592012 RABL2BQ9UNT1 228 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 B3GALT5Q9Y2C3 310 aa17.67■□□□□ 0.42
MBD3-209ENST00000592012 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.66■□□□□ 0.42
MBD3-209ENST00000592012 KLK3P07288 261 aaPredicted RBP17.66■□□□□ 0.42
MBD3-209ENST00000592012 RAB25P57735 213 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 EIF2B1Q14232 305 aaKnown RBP17.66■□□□□ 0.42
MBD3-209ENST00000592012 DND1Q8IYX4 353 aaKnown RBP17.66■□□□□ 0.42
MBD3-209ENST00000592012 ZNF454Q8N9F8 522 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 SLC26A10Q8NG04 563 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 SMIM4Q8WVI0 70 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 PPP1R14AQ96A00 147 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 ALKBH4Q9NXW9 302 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 GPN3Q9UHW5 284 aaPredicted RBP17.66■□□□□ 0.42
MBD3-209ENST00000592012 FBXL2Q9UKC9 423 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 SLC22A13Q9Y226 551 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 RBMX2Q9Y388 322 aaKnown RBP17.66■□□□□ 0.42
MBD3-209ENST00000592012 CENPXA8MT69 81 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 WNT11O96014 354 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 MAS1P04201 325 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 UMODP07911 640 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 BTG1P62324 171 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 CD83Q01151 205 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 MYBPHQ13203 477 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 MTFR2Q6P444 385 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 MDGA2Q7Z553 956 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 OR2M3Q8NG83 312 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 OR2B2Q9GZK3 357 aa17.66■□□□□ 0.42
MBD3-209ENST00000592012 MED12Q93074 2177 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 IGKV1D-43A0A0B4J1Z2 117 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 KLF7O75840 302 aaPredicted RBP17.65■□□□□ 0.42
MBD3-209ENST00000592012 IFITM2Q01629 132 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 C19orf57Q0VDD7 668 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 OR7E24Q6IFN5 339 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 SLC23A3Q6PIS1 610 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 NHLRC1Q6VVB1 395 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 SERPINA12Q8IW75 414 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 WDSUB1Q8N9V3 476 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 MR1Q95460 341 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 C5orf34Q96MH7 638 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 GTPBP2Q9BX10 602 aaKnown RBP17.65■□□□□ 0.42
MBD3-209ENST00000592012 IGHV1-45A0A0A0MS14 117 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 RIDAP52758 137 aaKnown RBP17.65■□□□□ 0.42
MBD3-209ENST00000592012 FOXK1P85037 733 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 MC2RQ01718 297 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 SIGLEC14Q08ET2 396 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 PCK2Q16822 640 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 FAM198BQ6UWH4 519 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 TMPRSS12Q86WS5 348 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 OR52N5Q8NH56 324 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 SYNPRQ8TBG9 265 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 CAPSLQ8WWF8 208 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 S100A16Q96FQ6 103 aaKnown RBP17.65■□□□□ 0.42
MBD3-209ENST00000592012 TP63Q9H3D4 680 aaPredicted RBP17.65■□□□□ 0.42
MBD3-209ENST00000592012 AUNIPQ9H7T9 357 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 SERINC1Q9NRX5 453 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 B3GAT1Q9P2W7 334 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 LRP12Q9Y561 859 aa17.65■□□□□ 0.42
MBD3-209ENST00000592012 CHCHD2Q9Y6H1 151 aaPredicted RBP17.65■□□□□ 0.42
MBD3-209ENST00000592012 ANXA2P2A6NMY6 339 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 H0YC42 278 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 ANXA2P07355 339 aaKnown RBP17.64■□□□□ 0.41
MBD3-209ENST00000592012 CELA2AP08217 269 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 RAB40ALP0C0E4 278 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 MFGE8Q08431 387 aaPredicted RBP17.64■□□□□ 0.41
MBD3-209ENST00000592012 FAM205BPQ63HN1 556 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 DNM1P34Q6PK57 102 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 RAB40AQ8WXH6 277 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 IMMP1LQ96LU5 166 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 RPH3AQ9Y2J0 694 aaPredicted RBP17.64■□□□□ 0.41
MBD3-209ENST00000592012 A0A1W2PNV4 684 aa17.64■□□□□ 0.41
MBD3-209ENST00000592012 CSRP1P21291 193 aaKnown RBP17.64■□□□□ 0.41
MBD3-209ENST00000592012 TCEA1P23193 301 aaKnown RBP17.64■□□□□ 0.41
MBD3-209ENST00000592012 KLF9Q13886 244 aaPredicted RBP17.64■□□□□ 0.41
MBD3-209ENST00000592012 LINGO2Q7L985 606 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms