RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 CDC40O60508 579 aaKnown RBP eCLIP6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 PTP4A3O75365 173 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CXCR1P25024 350 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CASP3P42574 277 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 GPR4P46093 362 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 SMSP52788 366 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 GAS1P54826 345 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CXCR4P61073 352 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CSNK2BP67870 215 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CDK5Q00535 292 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CD47Q08722 323 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 Q0VFX4 171 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 AIMP2Q13155 320 aaKnown RBP6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 COL28A1Q2UY09 1125 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 C6orf141Q5SZD1 244 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 SLX4IPQ5VYV7 408 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 SLC22A10Q63ZE4 541 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 SLC30A6Q6NXT4 461 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 TMEM154Q6P9G4 183 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CASP12Q6UXS9 341 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 WDR88Q6ZMY6 472 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 SLC43A2Q8N370 569 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 TMEM116Q8NCL8 245 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 OR10G3Q8NGC4 313 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 FAM81AQ8TBF8 368 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 GPR119Q8TDV5 335 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 TRUB1Q8WWH5 349 aaKnown RBP6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 OSTF1Q92882 214 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 BPIFA2Q96DR5 249 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 GPA33Q99795 319 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 NUDT16L1Q9BRJ7 211 aaKnown RBP6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 TMEM43Q9BTV4 400 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 TEX12Q9BXU0 123 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 PRRG3Q9BZD7 231 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 SLC25A19Q9HC21 320 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 MEPEQ9NQ76 525 aaPredicted RBP6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 BATF3Q9NR55 127 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 HPF1Q9NWY4 346 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 IMPAD1Q9NX62 359 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 IL20Q9NYY1 176 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 CNIH4Q9P003 139 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 IL17BQ9UHF5 180 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 TEKT2Q9UIF3 430 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 BLOC1S6Q9UL45 172 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 WIF1Q9Y5W5 379 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 MRPS18BQ9Y676 258 aaKnown RBP6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 PCNX3Q9H6A9 2034 aa6.94□□□□□ -1.3
NEDD4L-230ENST00000590638 EML6Q6ZMW3 1958 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 A0A087WXM4 84 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 EFCAB9A8MZ26 197 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 PTGES3LE9PB15 166 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 KPNA4O00629 521 aaPredicted RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 TLX3O43711 291 aaPredicted RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 HCN1O60741 890 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 SLC25A12O75746 678 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 RCBTB2O95199 551 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 SOX14O95416 240 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 CCDC159P0C7I6 412 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 SAGP10523 405 aaPredicted RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 EDN2P20800 178 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ELK4P28324 431 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 TTKP33981 857 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 PTGDSP41222 190 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 SLC9A3P48764 834 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 POLR2HP52434 150 aaKnown RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 CRYZQ08257 329 aaKnown RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 GINS1Q14691 196 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 MAD2L1BPQ15013 274 aaPredicted RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 QPRTQ15274 297 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ACER2Q5QJU3 275 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 DCAF10Q5QP82 559 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 PXDC1Q5TGL8 231 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 TMEM236Q5W0B7 351 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ZNF626Q68DY1 528 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 C12orf73Q69YU5 71 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 SLC27A4Q6P1M0 643 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 Q6ZPB1 254 aaPredicted RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 RTL4Q6ZR62 310 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 GRINAQ7Z429 371 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ENTHD1Q8IYW4 607 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 CLEC1AQ8NC01 280 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 GJC3Q8NFK1 279 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 TSPAN14Q8NG11 270 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 PFN4Q8NHR9 129 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 RHOXF1Q8NHV9 184 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 PAQR8Q8TEZ7 354 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ST8SIA1Q92185 356 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 PSMF1Q92530 271 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 SGTBQ96EQ0 304 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 THOC3Q96J01 351 aaKnown RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 Q96MT0 163 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ANGPTL4Q9BY76 406 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 MRPS26Q9BYN8 205 aaKnown RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ADNPQ9H2P0 1102 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 DSN1Q9H410 356 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 PTGES2Q9H7Z7 377 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 TUBA8Q9NY65 449 aaPredicted RBP6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 SCN3BQ9NY72 215 aa6.93□□□□□ -1.3
NEDD4L-230ENST00000590638 ABI3Q9P2A4 366 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms