RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ACTRT3Q9BYD9 372 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 MED17Q9NVC6 651 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 ICKQ9UPZ9 632 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 ASCC3Q8N3C0 2202 aaKnown RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 MYO15AQ9UKN7 3530 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 OR1F1O43749 312 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 SLCO2B1O94956 709 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 FHITP49789 147 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 KHKP50053 298 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 RAB5CP51148 216 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 CAV2P51636 162 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 MRPS10P82664 201 aaKnown RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 MPPED2Q15777 294 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 RPL7L1Q6DKI1 246 aaKnown RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 SLC39A5Q6ZMH5 540 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 SLC35F2Q8IXU6 374 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 CRIPAKQ8N1N5 446 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 SLC43A2Q8N370 569 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 BPIFB2Q8N4F0 458 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 PAQR4Q8N4S7 273 aaPredicted RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 ADAD2Q8NCV1 583 aaKnown RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 BSCL2Q96G97 398 aaPredicted RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 LPAR3Q9UBY5 353 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 VSIG4Q9Y279 399 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 PUS1Q9Y606 427 aaKnown RBP eCLIP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 A0A1B0GWJ7 208 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 H0YIZ8 118 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 CLDN4O14493 209 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 KLF4O43474 513 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 ADAP1O75689 374 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 C1orf105O95561 183 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 PMS2P2O95744 297 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 HIST1H1CP16403 213 aaKnown RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 EPCAMP16422 314 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 MDKP21741 143 aaPredicted RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 BSGP35613 385 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 SSR2P43308 183 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 IL13RA1P78552 427 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF674Q2M3X9 581 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 OR51F2Q8NH61 342 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 PHYHIPLQ96FC7 376 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 POLE3Q9NRF9 147 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 CMC2Q9NRP2 79 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 KLHL28Q9NXS3 571 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF223Q9UK11 482 aaPredicted RBP13.79□□□□□ -0.2
CIRBP-228ENST00000590347 PRUNE2Q8WUY3 3088 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 TMEM235A6NFC5 223 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 PRAMEF26H0Y7S4 382 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 LEFTY2O00292 366 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 EREGO14944 169 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 SLC16A5O15375 505 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 CYTIPO60759 359 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 GNRH1P01148 92 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 HPGDP15428 266 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 SERPINF1P36955 418 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 MECP2P51608 486 aaKnown RBP13.78□□□□□ -0.2
CIRBP-228ENST00000590347 DECR1Q16698 335 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF385CQ66K41 422 aaPredicted RBP13.78□□□□□ -0.2
CIRBP-228ENST00000590347 SLC8B1Q6J4K2 584 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 Q6ZVU0 165 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 PLPP7Q8NBV4 271 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 NMNAT3Q96T66 252 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 EIF5A2Q9GZV4 153 aaKnown RBP13.78□□□□□ -0.2
CIRBP-228ENST00000590347 FBXO34Q9NWN3 711 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 GSKIPQ9P0R6 139 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 PPP4R1LQ9P1A2 415 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 FOXE1O00358 373 aaPredicted RBP13.78□□□□□ -0.2
CIRBP-228ENST00000590347 CSF1P09603 554 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 FOSL2P15408 326 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 SULT1A1P50225 295 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 OR4N5Q8IXE1 308 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 SHISA5Q8N114 240 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 GVQW1Q8N7I0 195 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 BPIFA2Q96DR5 249 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 CAMK1GQ96NX5 476 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 G6PC3Q9BUM1 346 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 OR5AC2Q9NZP5 309 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 IL36AQ9UHA7 158 aa13.78□□□□□ -0.2
CIRBP-228ENST00000590347 MRPS33Q9Y291 106 aaKnown RBP13.78□□□□□ -0.2
CIRBP-228ENST00000590347 NPIPB9F8W1W9 429 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 OGG1O15527 345 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 CTAG2O75638 210 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 PBX2P40425 430 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF616Q08AN1 781 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 NSUN5P2Q63ZY6 315 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 Q6ZRG5 221 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 RTN4RL2Q86UN3 420 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 TEX19Q8NA77 164 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 CCDC107Q8WV48 283 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 CDS1Q92903 461 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 PPP1R14AQ96A00 147 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 INTS14Q96SY0 518 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 CHST5Q9GZS9 411 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 EGLN1Q9GZT9 426 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 SYT4Q9H2B2 425 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 CYTL1Q9NRR1 136 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 FBXO7Q9Y3I1 522 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 MYO9BQ13459 2157 aa13.77□□□□□ -0.2
CIRBP-228ENST00000590347 C1QL1O75973 258 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms