RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 KCNS3Q9BQ31 491 aa15.73■□□□□ 0.11
DDX39A-212ENST00000590260 MUC13Q9H3R2 512 aa15.73■□□□□ 0.11
DDX39A-212ENST00000590260 STX18Q9P2W9 335 aaKnown RBP15.73■□□□□ 0.11
DDX39A-212ENST00000590260 CR1P17927 2039 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 TEX13CA0A0J9YWL9 993 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 RAB36O95755 333 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 RPL4P36578 427 aaKnown RBP15.72■□□□□ 0.11
DDX39A-212ENST00000590260 SERPINF1P36955 418 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 KRTAP1-1Q07627 177 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 SNTB2Q13425 540 aaKnown RBP15.72■□□□□ 0.11
DDX39A-212ENST00000590260 ENDOGQ14249 297 aaKnown RBP15.72■□□□□ 0.11
DDX39A-212ENST00000590260 MTX3Q5HYI7 312 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 THEM4Q5T1C6 240 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 FAM205BPQ63HN1 556 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 C1orf94Q6P1W5 598 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 SLC16A14Q7RTX9 510 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 CPEB3Q8NE35 698 aaKnown RBP15.72■□□□□ 0.11
DDX39A-212ENST00000590260 CCDC124Q96CT7 223 aaKnown RBP15.72■□□□□ 0.11
DDX39A-212ENST00000590260 ASB9Q96DX5 294 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 ZNF570Q96NI8 536 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 SORCS2Q96PQ0 1159 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 BTBD10Q9BSF8 475 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 THTPAQ9BU02 230 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 PLK3Q9H4B4 646 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 SIAEQ9HAT2 523 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 NF1P21359 2839 aa15.72■□□□□ 0.11
DDX39A-212ENST00000590260 ZANQ9Y493 2812 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 A0A096LNT2 108 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 PRSS37A4D1T9 235 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 A6NIZ1 184 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 SMAD7O15105 426 aaKnown RBP15.71■□□□□ 0.11
DDX39A-212ENST00000590260 SSX4O60224 188 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 TXNDC12O95881 172 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 CTLA4P16410 223 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 ZNF32P17041 273 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 FPR3P25089 353 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 LAP3P28838 519 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 CDKN2AP42771 156 aaKnown RBP15.71■□□□□ 0.11
DDX39A-212ENST00000590260 SMIM11AP58511 58 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 RAP1BP61224 184 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 RAP1AP62834 184 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 DAG1Q14118 895 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 FAM27BQ5VT28 67 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 OTPQ5XKR4 325 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 UGT2A3Q6UWM9 527 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 ADGRG5Q8IZF4 528 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 MAPK1IP1LQ8NDC0 245 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 IL17RDQ8NFM7 739 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 OR9Q2Q8NGE9 314 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 FOXN4Q96NZ1 517 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 DOK1Q99704 481 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 OR52D1Q9H346 318 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 MAGIXQ9H6Y5 334 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 GRHPRQ9UBQ7 328 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 AURKCQ9UQB9 309 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 IER3IP1Q9Y5U9 82 aa15.71■□□□□ 0.11
DDX39A-212ENST00000590260 B9A039 149 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 DCTN6O00399 190 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 OR10H3O60404 316 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 FARS2O95363 451 aaKnown RBP15.7■□□□□ 0.1
DDX39A-212ENST00000590260 PPP1R3DO95685 299 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 LY6G6DO95868 133 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 NPR2P20594 1047 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 SDHAP31040 664 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 PSG4Q00888 419 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 KRR1Q13601 381 aaKnown RBP15.7■□□□□ 0.1
DDX39A-212ENST00000590260 SGCAQ16586 387 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 RFX4Q33E94 735 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 SLC36A2Q495M3 483 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 SMARCD3Q6STE5 483 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 Q71RC1 249 aaPredicted RBP15.7■□□□□ 0.1
DDX39A-212ENST00000590260 LRP11Q86VZ4 500 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 RBP7Q96R05 134 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 BDH2Q9BUT1 245 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 MRPL37Q9BZE1 423 aaKnown RBP15.7■□□□□ 0.1
DDX39A-212ENST00000590260 WNT5BQ9H1J7 359 aa15.7■□□□□ 0.1
DDX39A-212ENST00000590260 VSX1Q9NZR4 365 aaPredicted RBP15.7■□□□□ 0.1
DDX39A-212ENST00000590260 MYEF2Q9P2K5 600 aaKnown RBP15.7■□□□□ 0.1
DDX39A-212ENST00000590260 ANK3Q12955 4377 aaKnown RBP15.69■□□□□ 0.1
DDX39A-212ENST00000590260 LOC100509620A0A075B734 347 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 IGHV4-30-2A0A087WSY4 118 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 RNF223E7ERA6 249 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 SOCS2O14508 198 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 APEX1P27695 318 aaKnown RBP15.69■□□□□ 0.1
DDX39A-212ENST00000590260 ERVS71-1P61550 626 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 CHRNB3Q05901 458 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 PABPC1L2AQ5JQF8 200 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 TMEM53Q6P2H8 277 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 DPY19L2P2Q6ZN68 376 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 BIVMQ86UB2 503 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 ZCCHC24Q8N2G6 241 aaKnown RBP15.69■□□□□ 0.1
DDX39A-212ENST00000590260 SVOPLQ8N434 492 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 ZNF525Q8N782 197 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 SLC30A7Q8NEW0 376 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 OR10H5Q8NGA6 315 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 AKR7LQ8NHP1 331 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 FANK1Q8TC84 345 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 SAMD8Q96LT4 415 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 ZNF416Q9BWM5 594 aa15.69■□□□□ 0.1
DDX39A-212ENST00000590260 SYT4Q9H2B2 425 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms