RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 FOXN4Q96NZ1 517 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 HDHD5Q9BXW7 423 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 ANKRD60Q9BZ19 345 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 SEC61A2Q9H9S3 476 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 MOKQ9UQ07 419 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 WIPF3A6NGB9 483 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 RAD51DO75771 328 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 SEC14L2O76054 403 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 GLCEO94923 617 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 B4GALT1P15291 398 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 NPR2P20594 1047 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 PSMB1P20618 241 aaKnown RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 SLC2A5P22732 501 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 CDAP32320 146 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 BLVRAP53004 296 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 ISL1P61371 349 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 RPS7P62081 194 aaKnown RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 MRPS34P82930 218 aaKnown RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 FAM27E3Q08E93 113 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 APOFQ13790 326 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 TSC22D1Q15714 1073 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 OCLNQ16625 522 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 SLC35D3Q5M8T2 416 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 ANKRD16Q6P6B7 361 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 FOXL2NBQ6ZUU3 175 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 ZNF627Q7L945 461 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 BHLHA15Q7RTS1 189 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 THAP5Q7Z6K1 395 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 C1orf162Q8NEQ5 155 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 OR6K6Q8NGW6 343 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 RNASE6Q93091 150 aaKnown RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 Q96MT0 163 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 ZNF582Q96NG8 517 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-211ENST00000589753 NELFAQ9H3P2 528 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 Q9H521 79 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 CLN6Q9NWW5 311 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 DNAJC27Q9NZQ0 273 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 AASSQ9UDR5 926 aa13.33□□□□□ -0.28
ATG4D-211ENST00000589753 A0A096LPE4 126 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 A0A1W2PPZ6 126 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 SLC22A31A6NKX4 558 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 ENTPD6O75354 484 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 GPANK1O95872 356 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 HLA-DQA2P01906 255 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 GAAP10253 952 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 MYF6P23409 242 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 IL32P24001 234 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 FMO3P31513 532 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 CDH11P55287 796 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 HSF2Q03933 536 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 SRSF1Q07955 248 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATG4D-211ENST00000589753 GABRA6Q16445 453 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 SGCAQ16586 387 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 NRN1LQ496H8 165 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 LINC01590Q5TEZ4 76 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 LCN1P1Q5VSP4 162 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 OR7E24Q6IFN5 339 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 KLHL24Q6TFL4 600 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 MEPCEQ7L2J0 689 aaKnown RBP13.32□□□□□ -0.28
ATG4D-211ENST00000589753 SLC22A24Q8N4F4 322 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 APH1BQ8WW43 257 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 HTRA1Q92743 480 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 BCL2L2Q92843 193 aaPredicted RBP13.32□□□□□ -0.28
ATG4D-211ENST00000589753 RFKQ969G6 155 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 NABP1Q96AH0 204 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 TEAD3Q99594 435 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 SIAEQ9HAT2 523 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 POLE4Q9NR33 117 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 FREM1Q5H8C1 2179 aa13.32□□□□□ -0.28
ATG4D-211ENST00000589753 ALPK2Q86TB3 2170 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 CCDC182A6NF36 153 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 SNTNA6NMZ2 147 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 C16orf97H3BN30 126 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 MPZL1O95297 269 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 FARS2O95363 451 aaKnown RBP13.31□□□□□ -0.28
ATG4D-211ENST00000589753 OR8G3PP0DMU2 310 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 MSR1P21757 451 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 GSTT1P30711 240 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 HTR1FP30939 366 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 UGT2B10P36537 528 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 TEKQ02763 1124 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 TFF3Q07654 80 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 KCNMB1Q16558 191 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 TBRG1Q3YBR2 411 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 C17orf78Q8N4C9 275 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 STEAP2Q8NFT2 490 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 SLC26A10Q8NG04 563 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 CNIH3Q8TBE1 160 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 SSC4DQ8WTU2 575 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 C11orf40Q8WZ69 217 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 ZMYND19Q96E35 227 aaPredicted RBP13.31□□□□□ -0.28
ATG4D-211ENST00000589753 BOD1Q96IK1 185 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 CNBD2Q96M20 576 aa13.31□□□□□ -0.28
ATG4D-211ENST00000589753 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.31□□□□□ -0.28
ATG4D-211ENST00000589753 TVP23AA6NH52 213 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 DENRO43583 198 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms