RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RASSF5Q8WWW0 418 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 DIRC2Q96SL1 478 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 CPPED1Q9BRF8 314 aaPredicted RBP11.89□□□□□ -0.51
VMP1-209ENST00000588915 RABEP2Q9H5N1 569 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 SMURF2Q9HAU4 748 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 DDX28Q9NUL7 540 aaKnown RBP11.89□□□□□ -0.51
VMP1-209ENST00000588915 EIF3KQ9UBQ5 218 aaKnown RBP11.89□□□□□ -0.51
VMP1-209ENST00000588915 A0A1W2PRG6 482 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 CPSF4LA6NMK7 179 aaKnown RBP11.88□□□□□ -0.51
VMP1-209ENST00000588915 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 BLOC1S5-TXNDC5H3BN57 136 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 H3BSA7 217 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 RGS9O75916 674 aaPredicted RBP11.88□□□□□ -0.51
VMP1-209ENST00000588915 UMPSP11172 480 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 NR2C1P13056 603 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 GCH1P30793 250 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 DAP3P51398 398 aaKnown RBP11.88□□□□□ -0.51
VMP1-209ENST00000588915 MRPS34P82930 218 aaKnown RBP11.88□□□□□ -0.51
VMP1-209ENST00000588915 FOXL1Q12952 345 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 TSTQ16762 297 aaKnown RBP11.88□□□□□ -0.51
VMP1-209ENST00000588915 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 INTS11Q5TA45 600 aaKnown RBP11.88□□□□□ -0.51
VMP1-209ENST00000588915 MBNL2Q5VZF2 373 aaKnown RBP11.88□□□□□ -0.51
VMP1-209ENST00000588915 DPP10Q8N608 796 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 NOXO1Q8NFA2 376 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 LIPHQ8WWY8 451 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 ZNF347Q96SE7 839 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 SLC6A7Q99884 636 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 ZNF747Q9BV97 191 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 EGLN1Q9GZT9 426 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
VMP1-209ENST00000588915 PLSCR5A0PG75 271 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 GMNCA6NCL1 334 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 MCIDASD6RGH6 385 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 ICMTO60725 284 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 TRMUO75648 421 aaKnown RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 UBOX5O94941 541 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 PRSS23O95084 383 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 TSPAN19P0C672 248 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 HKR1P10072 659 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ACADSP16219 412 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 CD247P20963 164 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 STOMP27105 288 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 MMP15P51511 669 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 UGT2B15P54855 530 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 UBA52P62987 128 aaKnown RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 CYP51A1Q16850 503 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 AGKQ53H12 422 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ZMAT1Q5H9K5 638 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 PABPC1L2AQ5JQF8 200 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 PRR31Q5SQ13 230 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 LRRC18Q8N456 261 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ICA1LQ8NDH6 482 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ST7LQ8TDW4 575 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 TSPEARQ8WU66 669 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 STON2Q8WXE9 905 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ASB10Q8WXI3 467 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 CCL17Q92583 94 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 DVL3Q92997 716 aaPredicted RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 POP5Q969H6 163 aaKnown RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 ZBTB9Q96C00 473 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 MARS2Q96GW9 593 aaKnown RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 POM121L2Q96KW2 1035 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 GPA33Q99795 319 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 GAL3ST1Q99999 423 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 PRSS27Q9BQR3 290 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 EBF4Q9BQW3 602 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 POLR2J2Q9GZM3 115 aaKnown RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 POLR2J3Q9H1A7 115 aaKnown RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 ZNF696Q9H7X3 374 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ZMAT3Q9HA38 289 aaKnown RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 CCNB1IP1Q9NPC3 277 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 ESM1Q9NQ30 184 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 OPN4Q9UHM6 478 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 KLHL21Q9UJP4 597 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 LEF1Q9UJU2 399 aaPredicted RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 ZDHHC8Q9ULC8 765 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 SLC7A7Q9UM01 511 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
VMP1-209ENST00000588915 NDUFAF1Q9Y375 327 aa11.87□□□□□ -0.51
VMP1-209ENST00000588915 FOXH1O75593 365 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 IGHV1-46P01743 117 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 MT-ND1P03886 318 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 OPN1SWP03999 348 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 CD55P08174 381 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 FUT1P19526 365 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 RBM34P42696 430 aaKnown RBP11.86□□□□□ -0.51
VMP1-209ENST00000588915 RPL18Q07020 188 aaKnown RBP11.86□□□□□ -0.51
VMP1-209ENST00000588915 TAF11Q15544 211 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 THEM4Q5T1C6 240 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 RBMS3Q6XE24 437 aaKnown RBP11.86□□□□□ -0.51
VMP1-209ENST00000588915 RBM45Q8IUH3 476 aaKnown RBP11.86□□□□□ -0.51
VMP1-209ENST00000588915 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms