RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 CELA3AP09093 270 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 H2BFMP0C1H6 154 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 LIMS3P0CW19 117 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 LIMS4P0CW20 117 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CTLA4P16410 223 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CD53P19397 219 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CELP19835 753 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 NPR2P20594 1047 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 MSR1P21757 451 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 EDNRAP25101 427 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 HOXC12P31275 282 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CLDN18P56856 261 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 TUBA1BP68363 451 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 H3F3AP84243 136 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 PMP22Q01453 160 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 RBPJQ06330 500 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 FMODQ06828 376 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 C19orf57Q0VDD7 668 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 GPR50Q13585 617 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 SLC17A1Q14916 467 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 EIF2S3LQ2VIR3 472 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 CDONQ4KMG0 1287 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CCDC58Q4VC31 144 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 C4orf46Q504U0 113 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 TP53I3Q53FA7 332 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 ZNF362Q5T0B9 420 aaPredicted RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 OR2A2Q6IF42 318 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 RPUSD3Q6P087 351 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 RPL22L1Q6P5R6 122 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 PAMR1Q6UXH9 720 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CREB3L2Q70SY1 520 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 TUBA1AQ71U36 451 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 TRILQ7L0X0 811 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 VASH1Q7L8A9 365 aaPredicted RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 DPY19L4Q7Z388 723 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CDC20BQ86Y33 519 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 ZNF100Q8IYN0 542 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 OR6V1Q8N148 313 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 UBE2J2Q8N2K1 259 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 MS4A15Q8N5U1 240 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 OR52N5Q8NH56 324 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 OTOSQ8NHW6 89 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 ZPLD1Q8TCW7 415 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 RNF128Q8TEB7 428 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 NANOS1Q8WY41 292 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 ZCCHC14Q8WYQ9 949 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 TMEM45BQ96B21 275 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 APH1AQ96BI3 265 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 YIPF6Q96EC8 236 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 ADGRG7Q96K78 797 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 OPALINQ96PE5 141 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 TSSK2Q96PF2 358 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 OR2M2Q96R28 347 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 OR5M11Q96RB7 305 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 UCN2Q96RP3 112 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CHCHD6Q9BRQ6 235 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 DCUN1D5Q9BTE7 237 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 RBM24Q9BX46 236 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 SRXN1Q9BYN0 137 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 RBM38Q9H0Z9 239 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 SLITRK2Q9H156 845 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 SLCO5A1Q9H2Y9 848 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 NELFAQ9H3P2 528 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 C1orf198Q9H425 327 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 NIPAL2Q9H841 368 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 MOB1AQ9H8S9 216 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 GP6Q9HCN6 339 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 BABAM2Q9NXR7 383 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 B3GAT1Q9P2W7 334 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 CLEC2DQ9UHP7 191 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 COA3Q9Y2R0 106 aaPredicted RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 LSM2Q9Y333 95 aaKnown RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 EMC9Q9Y3B6 208 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 ZNF175Q9Y473 711 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 FLVCR1Q9Y5Y0 555 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 AHCTF1Q8WYP5 2266 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 DOCK7Q96N67 2140 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 MED12LQ86YW9 2145 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 DNAJC13O75165 2243 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 FRYLO94915 3013 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 IGLV1-36A0A0B4J1U3 117 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 TRBV2A0A0J9YWF9 115 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 ZNF724A8MTY0 619 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 ZNF879B4DU55 563 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 ZNF878C9JN71 531 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 ZNF593O00488 134 aaPredicted RBP5.5□□□□□ -1.53
LIG3-206ENST00000586058 ZNF254O75437 659 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 ARL6IP5O75915 188 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 WISP1O95388 367 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 CD2P06729 351 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 QDPRP09417 244 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 SFTPCP11686 197 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 GABRA1P14867 456 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 CPN1P15169 458 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 ABOP16442 354 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 GALP22466 123 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 GADD45AP24522 165 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 CALRP27797 417 aaKnown RBP5.5□□□□□ -1.53
LIG3-206ENST00000586058 S100A5P33763 92 aa5.5□□□□□ -1.53
LIG3-206ENST00000586058 PTGER4P35408 488 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms