RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RASD2Q96D21 266 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 WACQ9BTA9 647 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 OR51V1Q9H2C8 321 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 AMBNQ9NP70 447 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 PARPBPQ9NWS1 579 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 SH3BGRL2Q9UJC5 107 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 TRGV8A0A0C4DH27 118 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 SLC22A23A1A5C7 686 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 CD8B2A6NJW9 211 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 FAM183AA6NL82 134 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 C11orf98E9PRG8 122 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 CYTIPO60759 359 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 RAMP1O60894 148 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 TMCC2O75069 709 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 KHDRBS3O75525 346 aaKnown RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 AQP8O94778 261 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 MT-ND5P03915 603 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 SCG5P05408 212 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 GLI4P10075 376 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 GABRA1P14867 456 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 IFNGR1P15260 489 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 GALP22466 123 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 PSMB9P28065 219 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 C21orf33P30042 268 aaPredicted RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 PTGER4P35408 488 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 CDKN2AP42771 156 aaKnown RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 EIF1AXP47813 144 aaKnown RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 ZNF133P52736 654 aaPredicted RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 SLC17A1Q14916 467 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 TRAM1Q15629 374 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 TIGD6Q17RP2 521 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 NRN1LQ496H8 165 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 TEX30Q5JUR7 227 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 RIPPLY2Q5TAB7 128 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 NSUN5P2Q63ZY6 315 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 NHLRC1Q6VVB1 395 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 RHOUQ7L0Q8 258 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 SHFQ7M4L6 423 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 SATL1Q86VE3 508 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 TMEM99Q8N816 258 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 C9orf106Q8NAJ2 232 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 OR9K2Q8NGE7 335 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 OR51G2Q8NGK0 314 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 PRR7Q8TB68 274 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 ROBO4Q8WZ75 1007 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 MRPL13Q9BYD1 178 aaKnown RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 RBM38Q9H0Z9 239 aaKnown RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 TP63Q9H3D4 680 aaPredicted RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 ADGRL4Q9HBW9 690 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 B3GAT2Q9NPZ5 323 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 TRIM36Q9NQ86 728 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 RPRD1BQ9NQG5 326 aaKnown RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 RSL24D1Q9UHA3 163 aaKnown RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 ING1Q9UK53 422 aaPredicted RBP11.21□□□□□ -0.61
VMP1-202ENST00000585847 MEMO1Q9Y316 297 aa11.21□□□□□ -0.61
VMP1-202ENST00000585847 CREBBPQ92793 2442 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 INTS1Q8N201 2190 aaKnown RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 IGHV3-15A0A0B4J1V0 119 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 ZNF724A8MTY0 619 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 ZNF670-ZNF695F2Z2N8 137 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 CCRL2O00421 344 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 GUCA1AP43080 201 aaPredicted RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 ADORA2A-AS1P86434 159 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 EGR3Q06889 387 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 GALEQ14376 348 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 HIST3H3Q16695 136 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 CCDC58Q4VC31 144 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 LINC01590Q5TEZ4 76 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 ZNF544Q6NX49 715 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 CREB3L2Q70SY1 520 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 GPAT4Q86UL3 456 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 P2RY8Q86VZ1 359 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 CYB561A3Q8NBI2 242 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 OR6K6Q8NGW6 343 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 FNDC9Q8TBE3 224 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 THRSPQ92748 146 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 TRIB1Q96RU8 372 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 INTS14Q96SY0 518 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 DOK1Q99704 481 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 TTYH2Q9BSA4 534 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 SYT4Q9H2B2 425 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 CALHM2Q9HA72 323 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 ERVK13-1Q9NX77 482 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 LSM2Q9Y333 95 aaKnown RBP11.2□□□□□ -0.62
VMP1-202ENST00000585847 ITPR2Q14571 2701 aa11.2□□□□□ -0.62
VMP1-202ENST00000585847 PCNX1Q96RV3 2341 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 IGLV1-36A0A0B4J1U3 117 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 FIGNL2A6NMB9 653 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 C12orf71A8MTZ7 269 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 E9PLN8 166 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 SLC22A1O15245 554 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 SLC43A1O75387 559 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms