RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ACSM3Q53FZ2 586 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 DDI2Q5TDH0 399 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 LINC01590Q5TEZ4 76 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 ZNF468Q5VIY5 522 aaPredicted RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 HBMQ6B0K9 141 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 DPY19L4Q7Z388 723 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 YRDCQ86U90 279 aaKnown RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 TPRA1Q86W33 373 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 CDC20BQ86Y33 519 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 GLB1L2Q8IW92 636 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 GALNT16Q8N428 558 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 ZNF485Q8NCK3 441 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 OR2AJ1Q8NGZ0 328 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 OR5AK2Q8NH90 309 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 ADAMTS17Q8TE56 1095 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 THRSPQ92748 146 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 GHSRQ92847 366 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 SLC25A46Q96AG3 418 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 MIB2Q96AX9 1013 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 SLC25A44Q96H78 314 aaPredicted RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 NPAS1Q99742 590 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 SEC61A2Q9H9S3 476 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 SMURF1Q9HCE7 757 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 SH2D2AQ9NP31 389 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 ZFP64Q9NPA5 681 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 MED29Q9NX70 200 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 GTF2A1LQ9UNN4 478 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 TP53TG5Q9Y2B4 290 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 COA3Q9Y2R0 106 aaPredicted RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 KLF13Q9Y2Y9 288 aaPredicted RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 SF3B6Q9Y3B4 125 aaKnown RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 MRPS18CQ9Y3D5 142 aaKnown RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 CMAHPQ9Y471 501 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 CNTRLQ7Z7A1 2325 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 TLN1Q9Y490 2541 aaKnown RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 J3QRK9 145 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 PSMD9O00233 223 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 EIF1AYO14602 144 aaKnown RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 ADAM10O14672 748 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ZIC3O60481 467 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 GATBO75879 557 aaKnown RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 LALBAP00709 142 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 CD1AP06126 327 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 OR8G3PP0DMU2 310 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 GAAP10253 952 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 HLA-DOBP13765 273 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ZNF12P17014 697 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ENPP1P22413 925 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 MAPK3P27361 379 aaPredicted RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 TGM4P49221 684 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 MTNR1BP49286 362 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 RIDAP52758 137 aaKnown RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 PPP5CP53041 499 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 CLDN17P56750 224 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ARG2P78540 354 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 RASGEF1BQ0VAM2 473 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 CAMK2DQ13557 499 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ALKBH1Q13686 389 aaKnown RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 RGS21Q2M5E4 152 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 CARD17Q5XLA6 110 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 SPINK14Q6IE38 97 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 CD200R1LQ6Q8B3 271 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 KLHL24Q6TFL4 600 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 CHMP1BQ7LBR1 199 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 SSX6Q7RTT6 188 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 TIGD4Q8IY51 512 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ZNF676Q8N7Q3 588 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 FAM83FQ8NEG4 500 aaPredicted RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 OR6N1Q8NGY5 312 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 OTOSQ8NHW6 89 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ACOT12Q8WYK0 555 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 PHYHIPQ92561 330 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 SMIM19Q96E16 107 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 PELI1Q96FA3 418 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 SLC30A2Q9BRI3 323 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ZNF649Q9BS31 505 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 EMC6Q9BV81 110 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 NXF2Q9GZY0 626 aaKnown RBP8.3□□□□□ -1.08
SS18-220ENST00000582092 EXO5Q9H790 373 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 MARCH7Q9H992 704 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 B3GAT2Q9NPZ5 323 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 KLHL9Q9P2J3 617 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 B3GNT3Q9Y2A9 372 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 ZNF281Q9Y2X9 895 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 LOC400499M0QZD8 3231 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 LAMA5O15230 3695 aa8.3□□□□□ -1.08
SS18-220ENST00000582092 PCNX3Q9H6A9 2034 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 LOC102725191A0A1B0GVB3 256 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 IQCMA0A1B0GVH7 501 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 SLC35F4A4IF30 521 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 FAM25AB3EWG3 89 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 FAM25CB3EWG5 89 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 FAM25GB3EWG6 89 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 E9PI62 339 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ACOT7O00154 380 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 DCTN6O00399 190 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 TNFSF11O14788 317 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 MAGEB4O15481 346 aaPredicted RBP8.29□□□□□ -1.08
SS18-220ENST00000582092 DNPH1O43598 174 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 WISP1O95388 367 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms