RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 C10orf128Q5T292 105 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 ARMC4Q5T2S8 1044 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 AVPI1Q5T686 147 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 INTS11Q5TA45 600 aaKnown RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 USP51Q70EK9 711 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 CCDC80Q76M96 950 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 NANOGNBQ7Z5D8 188 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 PEG10Q86TG7 708 aaKnown RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 SYT14Q8NB59 555 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 RBM15BQ8NDT2 890 aaKnown RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 OR4M2Q8NGB6 313 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 VANGL1Q8TAA9 524 aaPredicted RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 RASSF5Q8WWW0 418 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 LIPHQ8WWY8 451 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 NMD3Q96D46 503 aaKnown RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 RAB39BQ96DA2 213 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 JMJD8Q96S16 334 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 TMPRSS13Q9BYE2 586 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 OR51B6Q9H340 312 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 NANOGQ9H9S0 305 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 SMURF2Q9HAU4 748 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 DECR2Q9NUI1 292 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 WIPI2Q9Y4P8 454 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 LOC105371242A0A075B767 164 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 NPIPB13A6NJU9 1138 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 CLDN25C9JDP6 229 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 NPIPB4C9JG80 1138 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 TRMUO75648 421 aaKnown RBP9.01□□□□□ -0.97
RFFL-209ENST00000581265 IGHV2-5P01817 119 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 F13BP05160 661 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 DRD4P21917 467 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 GATA3P23771 443 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 STOMP27105 288 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 RBM34P42696 430 aaKnown RBP9.01□□□□□ -0.97
RFFL-209ENST00000581265 DAP3P51398 398 aaKnown RBP9.01□□□□□ -0.97
RFFL-209ENST00000581265 MMP15P51511 669 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 HSF2Q03933 536 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 VMACQ2NL98 169 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 ZNF718Q3SXZ3 478 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 PABPC1L2AQ5JQF8 200 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 FAM27BQ5VT28 67 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 HIST2H2BDQ6DRA6 164 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 UNQ6126/PRO20091Q6UXV3 157 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 HDDC2Q7Z4H3 204 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 C1QL2Q7Z5L3 287 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 C1orf174Q8IYL3 243 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 LRRC18Q8N456 261 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 NOXO1Q8NFA2 376 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 OR1J1Q8NGS3 322 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 OR10A6Q8NH74 314 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 NANPQ8TBE9 248 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 SLC26A7Q8TE54 656 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 ASB10Q8WXI3 467 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 RAB1CQ92928 201 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 MARS2Q96GW9 593 aaKnown RBP9.01□□□□□ -0.97
RFFL-209ENST00000581265 TIMD4Q96H15 378 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 POM121L2Q96KW2 1035 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 RBM4Q9BWF3 364 aaKnown RBP9.01□□□□□ -0.97
RFFL-209ENST00000581265 KCNN2Q9H2S1 579 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 SAP30LQ9HAJ7 183 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 INIPQ9NRY2 104 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 STX18Q9P2W9 335 aaKnown RBP9.01□□□□□ -0.97
RFFL-209ENST00000581265 KLHL21Q9UJP4 597 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 UGT2A1Q9Y4X1 527 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 CACNG2Q9Y698 323 aa9.01□□□□□ -0.97
RFFL-209ENST00000581265 LOC100509620A0A075B734 347 aa9□□□□□ -0.97
RFFL-209ENST00000581265 MCIDASD6RGH6 385 aa9□□□□□ -0.97
RFFL-209ENST00000581265 TPD52L2O43399 206 aaKnown RBP9□□□□□ -0.97
RFFL-209ENST00000581265 ICMTO60725 284 aa9□□□□□ -0.97
RFFL-209ENST00000581265 RGS9O75916 674 aaPredicted RBP9□□□□□ -0.97
RFFL-209ENST00000581265 OR7A10O76100 309 aa9□□□□□ -0.97
RFFL-209ENST00000581265 UBOX5O94941 541 aa9□□□□□ -0.97
RFFL-209ENST00000581265 ADH4P08319 380 aa9□□□□□ -0.97
RFFL-209ENST00000581265 ZNF32P17041 273 aa9□□□□□ -0.97
RFFL-209ENST00000581265 LIPAP38571 399 aa9□□□□□ -0.97
RFFL-209ENST00000581265 AQP2P41181 271 aa9□□□□□ -0.97
RFFL-209ENST00000581265 WNT5AP41221 380 aa9□□□□□ -0.97
RFFL-209ENST00000581265 LIMS1P48059 325 aa9□□□□□ -0.97
RFFL-209ENST00000581265 ZNF81P51508 661 aa9□□□□□ -0.97
RFFL-209ENST00000581265 NFYCQ13952 458 aa9□□□□□ -0.97
RFFL-209ENST00000581265 LAPTM4AQ15012 233 aa9□□□□□ -0.97
RFFL-209ENST00000581265 TSTQ16762 297 aaKnown RBP9□□□□□ -0.97
RFFL-209ENST00000581265 PRR31Q5SQ13 230 aa9□□□□□ -0.97
RFFL-209ENST00000581265 THEM4Q5T1C6 240 aa9□□□□□ -0.97
RFFL-209ENST00000581265 MBNL2Q5VZF2 373 aaKnown RBP9□□□□□ -0.97
RFFL-209ENST00000581265 NKAIN4Q8IVV8 208 aa9□□□□□ -0.97
RFFL-209ENST00000581265 ZNF101Q8IZC7 436 aa9□□□□□ -0.97
RFFL-209ENST00000581265 ICA1LQ8NDH6 482 aa9□□□□□ -0.97
RFFL-209ENST00000581265 CCL17Q92583 94 aa9□□□□□ -0.97
RFFL-209ENST00000581265 GTF3AQ92664 365 aaKnown RBP9□□□□□ -0.97
RFFL-209ENST00000581265 NABP1Q96AH0 204 aa9□□□□□ -0.97
RFFL-209ENST00000581265 SGTBQ96EQ0 304 aa9□□□□□ -0.97
RFFL-209ENST00000581265 ELMOD3Q96FG2 381 aa9□□□□□ -0.97
RFFL-209ENST00000581265 ATP6V1G3Q96LB4 118 aa9□□□□□ -0.97
RFFL-209ENST00000581265 SUCNR1Q9BXA5 334 aa9□□□□□ -0.97
RFFL-209ENST00000581265 POLR2J2Q9GZM3 115 aaKnown RBP9□□□□□ -0.97
RFFL-209ENST00000581265 POLR2J3Q9H1A7 115 aaKnown RBP9□□□□□ -0.97
RFFL-209ENST00000581265 CCNB1IP1Q9NPC3 277 aa9□□□□□ -0.97
RFFL-209ENST00000581265 CYSLTR2Q9NS75 346 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms