RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 VN1R1Q9GZP7 353 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 SLITRK2Q9H156 845 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 EMC7Q9NPA0 242 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 ELF5Q9UKW6 265 aaPredicted RBP9.46□□□□□ -0.9
TOP3A-209ENST00000580095 B9D1Q9UPM9 204 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 FRG2CA6NGY1 282 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 G3V3Q6 166 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 GSTZ1O43708 216 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 SUSD5O60279 629 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 NDUFS6O75380 124 aaKnown RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 IFI6P09912 130 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 CSF2RBP32927 897 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 CAPZA2P47755 286 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ZBTB37Q5TC79 503 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 OR10K2Q6IF99 312 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM65Q6PI78 240 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 KRT77Q7Z794 578 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 LINC00346Q8IVM7 164 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 SLC43A2Q8N370 569 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 FTMTQ8N4E7 242 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF417Q8TAU3 575 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ZDHHC12Q96GR4 267 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF587Q96SQ5 575 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ADAM19Q9H013 955 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 HEXA-AS1Q9H8Q6 139 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 FBXL3Q9UKT7 428 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 VDAC3Q9Y277 283 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 MTCH2Q9Y6C9 303 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 U3KQ87 197 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 TRAV18A0A075B6X5 111 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 SOX1O00570 391 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 EIF1AYO14602 144 aaKnown RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 LMX1BO60663 402 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 OR6A2O95222 327 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 BGLAPP02818 100 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 RLN1P04808 185 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 CD27P26842 260 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ADAM8P78325 824 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 HSF2Q03933 536 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 DYRK1AQ13627 763 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 MFSD13AQ14CX5 517 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 PCGF3Q3KNV8 242 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 C14orf28Q4W4Y0 310 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM205Q6UW68 189 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 HAVCR1Q96D42 359 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ARL5BQ96KC2 179 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF578Q96N58 590 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 OR1F2PQ96R84 312 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 NUDT22Q9BRQ3 303 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 PTDSS2Q9BVG9 487 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF436Q9C0F3 470 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 WWTR1Q9GZV5 400 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 COMMD4Q9H0A8 199 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 SYNDIG1Q9H7V2 258 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 MRPL22Q9NWU5 206 aaKnown RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 MGAT4CQ9UBM8 478 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 CGGBP1Q9UFW8 167 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 MEIKINA0A087WXM9 373 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 IGKV3D-11A0A0A0MRZ8 115 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 TMED7-TICAM2A0A0A6YYA0 188 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 LOC101059948A0A1B0GTJ6 334 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 LILRA5A6NI73 299 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 METTL12A8MUP2 240 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 TEX46H3BTG2 121 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 GP1BBP13224 206 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 FBLP22087 321 aaKnown RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 EIF1AXP47813 144 aaKnown RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ISXQ2M1V0 245 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ASPHD2Q6ICH7 369 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 ARSKQ6UWY0 536 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 OR51A2Q8NGJ7 313 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 OTOSQ8NHW6 89 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 RPS4Y2Q8TD47 263 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 GPR148Q8TDV2 347 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 MIB2Q96AX9 1013 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 C4orf45Q96LM5 186 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 LAT2Q9GZY6 243 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 RANBP3Q9H6Z4 567 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-209ENST00000580095 DIABLOQ9NR28 239 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 COPZ2Q9P299 210 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 MOKQ9UQ07 419 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 TMED7Q9Y3B3 224 aa9.45□□□□□ -0.9
TOP3A-209ENST00000580095 DCDC2BA2VCK2 349 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 PRSS37A4D1T9 235 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 CCDC85CA6NKD9 419 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 LMO7DNF2Z398 122 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 H3BMH7 237 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 PYCARD-AS1I3L0S3 204 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 RAF1P04049 648 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 GUSBP08236 651 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 POU3F4P49335 361 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 ARRB1P49407 418 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-209ENST00000580095 FBXW4P57775 412 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 TSPAN5P62079 268 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 HSD11B2P80365 405 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 ELAVL1Q15717 326 aaKnown RBP9.44□□□□□ -0.9
TOP3A-209ENST00000580095 C2orf68Q2NKX9 166 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 FAM198BQ6UWH4 519 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms