RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ZFP3Q96NJ6 502 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 ZNF385AQ96PM9 386 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 INTS14Q96SY0 518 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 ULBP2Q9BZM5 246 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 YIPF3Q9GZM5 350 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 PAK1IP1Q9NWT1 392 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 CLCF1Q9UBD9 225 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 EMC9Q9Y3B6 208 aa12.34□□□□□ -0.43
CSNK1D-209ENST00000578904 E9PLN8 166 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF670-ZNF695F2Z2N8 137 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 CCL21O00585 134 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF432O94892 652 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 MT-ND2P03891 347 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 CRHP06850 196 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 SMIM18P0DKX4 95 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 CTLA4P16410 223 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 KLK2P20151 261 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 LAP3P28838 519 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ACTA2P62736 377 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ACTG2P63267 376 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 RUNX1T1Q06455 604 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ERI1Q8IV48 349 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 SLC35F2Q8IXU6 374 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 RPRMLQ8N4K4 120 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 KLHL36Q8N4N3 616 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ZIC4Q8N9L1 334 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 OR10H4Q8NGA5 316 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 OR51L1Q8NGJ5 315 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 HAVCR2Q8TDQ0 301 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 KISS1RQ969F8 398 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 MCHR2Q969V1 340 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 APH1AQ96BI3 265 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 TSSK2Q96PF2 358 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 VKORC1Q9BQB6 163 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 CDADC1Q9BWV3 514 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 LINC00470Q9BZP3 86 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 SLCO5A1Q9H2Y9 848 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 ADGRL4Q9HBW9 690 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 NDUFA13Q9P0J0 144 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 UPB1Q9UBR1 384 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 MEMO1Q9Y316 297 aa12.33□□□□□ -0.44
CSNK1D-209ENST00000578904 POLEQ07864 2286 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 IGLV1-36A0A0B4J1U3 117 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 A0A1B0GUH1 482 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 TMEM129A0AVI4 362 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 MBD3L4A6NDZ8 208 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 MBD3L3A6NE82 208 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 MBD3L5A6NJ08 208 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 AQP8O94778 261 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 TGM6O95932 706 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 IGHA1P01876 353 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 JUNBP17275 347 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 NPR2P20594 1047 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 C21orf33P30042 268 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 SELENOPP49908 381 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF133P52736 654 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 PER3P56645 1201 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 EMX1Q04741 257 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 C4orf17Q53FE4 359 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 LINC01590Q5TEZ4 76 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 NCCRP1Q6ZVX7 275 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF367Q7RTV3 350 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 TUSC5Q8IXB3 177 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 C9orf106Q8NAJ2 232 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 OR4F15Q8NGB8 312 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 OR6N2Q8NGY6 317 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 MBD3L2Q8NHZ7 208 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 ASB17Q8WXJ9 295 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 NSMAFQ92636 917 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 SIGLEC11Q96RL6 698 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 TTYH2Q9BSA4 534 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 WDR76Q9H967 626 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 MARCH7Q9H992 704 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 SEC61A2Q9H9S3 476 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 ACOT13Q9NPJ3 140 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 LAMP5Q9UJQ1 280 aa12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 COA3Q9Y2R0 106 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 CAB39Q9Y376 341 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-209ENST00000578904 TENM4Q6N022 2769 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 A0A1W2PPL8 197 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 C12orf71A8MTZ7 269 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 FAM171A2A8MVW0 826 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF587BE7ETH6 402 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 LRRTM2O43300 516 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 DHHO43323 396 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 SS18L1O75177 396 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 IL2RAP01589 272 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 HTR1AP08908 422 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 MRPL3P09001 348 aaKnown RBP12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 TACSTD2P09758 323 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms