RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
SMARCD2-205ENST00000577686 CPPED1Q9BRF8 314 aaPredicted RBP12.1□□□□□ -0.47
SMARCD2-205ENST00000577686 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
SMARCD2-205ENST00000577686 SMURF2Q9HAU4 748 aa12.1□□□□□ -0.47
SMARCD2-205ENST00000577686 TAS2R5Q9NYW4 299 aa12.1□□□□□ -0.47
SMARCD2-205ENST00000577686 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
SMARCD2-205ENST00000577686 PPIAL4EA0A075B759 164 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 TRBV5-3A0A0A0MS03 114 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 PPIAL4CA0A0B4J2A2 164 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 PPIAL4DF5H284 164 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 M0QX08 132 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 WIPF1O43516 503 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 TPST2O60704 377 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 DEAF1O75398 565 aaPredicted RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 ERLIN1O75477 346 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 ASAH2BP0C7U1 165 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 PPIAL4FP0DN26 164 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 EGR1P18146 543 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 TNFSF4P23510 183 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 STOMP27105 288 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 RBM34P42696 430 aaKnown RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 PCBP3P57721 371 aaKnown RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 PCBD1P61457 104 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 ERVS71-1P61550 626 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 AWAT1Q58HT5 328 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 ARMCX4Q5H9R4 360 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 PABPC1L2AQ5JQF8 200 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 C10orf128Q5T292 105 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 DHDDSQ86SQ9 333 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 FUNDC1Q8IVP5 155 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 LRRC18Q8N456 261 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 PAQR4Q8N4S7 273 aaPredicted RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 SPICQ8N5J4 248 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 OR6T1Q8NGN1 323 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 POP5Q969H6 163 aaKnown RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 TSPAN32Q96QS1 320 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 POLR2J2Q9GZM3 115 aaKnown RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 POLR2J3Q9H1A7 115 aaKnown RBP12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 ELOVL3Q9HB03 270 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 INIPQ9NRY2 104 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 SLAMF8Q9P0V8 285 aa12.09□□□□□ -0.47
SMARCD2-205ENST00000577686 SPRY3O43610 288 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 IGF2P01344 180 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 OPN1SWP03999 348 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 ACADSP16219 412 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 ADRA2CP18825 462 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 IFNA8P32881 189 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 PCGF2P35227 344 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 IDH3AP50213 366 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 UBA52P62987 128 aaKnown RBP12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 CD47Q08722 323 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 TAF11Q15544 211 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 HIST3H3Q16695 136 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 DUSP7Q16829 419 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 RUNDC3AQ59EK9 446 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 WDFY1Q8IWB7 410 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 ZBTB9Q96C00 473 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 SGTBQ96EQ0 304 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 MRI1Q9BV20 369 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 PCDHAC1Q9H158 963 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 NDUFAF1Q9Y375 327 aa12.08□□□□□ -0.48
SMARCD2-205ENST00000577686 C5orf49A4QMS7 147 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 HTR3EA5X5Y0 456 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 NPIPB13A6NJU9 1138 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 NPIPB4C9JG80 1138 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 IGHV1-46P01743 117 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 MT-ND1P03886 318 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 ADH4P08319 380 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 MMP7P09237 267 aaPredicted RBP12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 GSTM3P21266 225 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 TAS2R41P59536 307 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 RPL18Q07020 188 aaKnown RBP12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 MBNL2Q5VZF2 373 aaKnown RBP12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 C1orf229Q6ZS94 237 aaPredicted RBP12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 C10orf111Q8N326 155 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 KLHL36Q8N4N3 616 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 SYT14Q8NB59 555 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 DYDC1Q8WWB3 177 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 IPCEF1Q8WWN9 437 aaPredicted RBP12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 ASB10Q8WXI3 467 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 TLCD1Q96CP7 247 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 SEPHS2Q99611 448 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 CGREF1Q99674 301 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 ZNF426Q9BUY5 554 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 ZNF747Q9BV97 191 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 RSPO3Q9BXY4 272 aaPredicted RBP12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 IKZF5Q9H5V7 419 aa12.07□□□□□ -0.48
SMARCD2-205ENST00000577686 SURF4O15260 269 aa12.06□□□□□ -0.48
SMARCD2-205ENST00000577686 TIMM8AO60220 97 aaPredicted RBP12.06□□□□□ -0.48
SMARCD2-205ENST00000577686 TRMUO75648 421 aaKnown RBP12.06□□□□□ -0.48
SMARCD2-205ENST00000577686 OR7A10O76100 309 aa12.06□□□□□ -0.48
SMARCD2-205ENST00000577686 AVPP01185 164 aa12.06□□□□□ -0.48
SMARCD2-205ENST00000577686 IFNA14P01570 189 aa12.06□□□□□ -0.48
SMARCD2-205ENST00000577686 F13BP05160 661 aa12.06□□□□□ -0.48
SMARCD2-205ENST00000577686 CD55P08174 381 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms