RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 TCEA1P23193 301 aaKnown RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 SRD5A2P31213 254 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 ACVR1BP36896 505 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 PEX19P40855 299 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 DIO1P49895 249 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 OR2B6P58173 313 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 TAS2R43P59537 309 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 RPL27P61353 136 aaKnown RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 ACTA2P62736 377 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 ACTG2P63267 376 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 SLC35A1P78382 337 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 NKX6-1P78426 367 aaPredicted RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 ZP4Q12836 540 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 HSPB2Q16082 182 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 GDPGP1Q6ZNW5 385 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 SHFQ7M4L6 423 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 ARIH2OSQ8N7S6 290 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 LRRC75AQ8NAA5 344 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 RELL2Q8NC24 303 aaPredicted RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 NPEPL1Q8NDH3 523 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 ADPRHL1Q8NDY3 354 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 OR4F15Q8NGB8 312 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 OR6K6Q8NGW6 343 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 OR14L1PQ8NHC6 308 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 SMPDL3BQ92485 455 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 UFD1Q92890 307 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 RNASE6Q93091 150 aaKnown RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 ZNF524Q96C55 264 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 RASD2Q96D21 266 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 ZHX1-C8orf76Q96EF9 292 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 TSPAN32Q96QS1 320 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 OR5M11Q96RB7 305 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 SNX18Q96RF0 628 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 KLHDC3Q9BQ90 382 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 DCUN1D5Q9BTE7 237 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 NAA50Q9GZZ1 169 aaKnown RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 TXNIPQ9H3M7 391 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 SH2D2AQ9NP31 389 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 TAS2R16Q9NYV7 291 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 TAS2R5Q9NYW4 299 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 SPRR3Q9UBC9 169 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 CLEC2DQ9UHP7 191 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 TRAPPC4Q9Y296 219 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 CAB39Q9Y376 341 aaPredicted RBP9.04□□□□□ -0.96
SS18-207ENST00000577636 NOX1Q9Y5S8 564 aa9.04□□□□□ -0.96
SS18-207ENST00000577636 LOC100506127A0A0U1RQW1 187 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 CENPBD1B2RD01 187 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 FTCDNL1E5RQL4 147 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 LINC01387J3KSC0 135 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 SULT2B1O00204 365 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 SMAD7O15105 426 aaKnown RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 EIF1BO60739 113 aaKnown RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 GLCEO94923 617 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 PLGP00747 810 aaPredicted RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 IGHMP01871 453 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 GYPBP06028 91 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 MRPL3P09001 348 aaKnown RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 RFPL3SP0C7P2 107 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 OR2T7P0C7T2 308 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 LIMS3P0CW19 117 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 LIMS4P0CW20 117 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 EPXP11678 715 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 NR2C1P13056 603 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 SLC2A5P22732 501 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 HOXC12P31275 282 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 LIPAP38571 399 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 ASCL1P50553 236 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 TUBA1BP68363 451 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 CSNK2A1P68400 391 aaPredicted RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 BDH1Q02338 343 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 HSF2Q03933 536 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 FOXO1Q12778 655 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 ACKR1Q16570 336 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 DGUOKQ16854 277 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 TMEM176BQ3YBM2 270 aaPredicted RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 ZNF362Q5T0B9 420 aaPredicted RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 PDSS1Q5T2R2 415 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 TMEM225Q6GV28 225 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 SEM1Q6ZVN7 128 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 USP43Q70EL4 1123 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 TUBA1AQ71U36 451 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 FAM122BQ7Z309 247 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 LHFPL3Q86UP9 236 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 OR2T27Q8NH04 317 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 POC1BQ8TC44 478 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 GATAD2BQ8WXI9 593 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 DNAJA3Q96EY1 480 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 GNRHR2Q96P88 292 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 MNTQ99583 582 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 NAA11Q9BSU3 229 aaPredicted RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 ALG8Q9BVK2 526 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 HCAR1Q9BXC0 346 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 SLC6A15Q9H2J7 730 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 RERGLQ9H628 205 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 TMEM185BQ9H7F4 350 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 ZFP64Q9NPA5 681 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms