RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SRD5A1P18405 259 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 NPR2P20594 1047 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 AQP1P29972 269 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 RAD52P43351 418 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 CDK6Q00534 326 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 PIGFQ07326 219 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 OR1Q1Q15612 314 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 TRIP10Q15642 601 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 EFNB3Q15768 340 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 ZSWIM7Q19AV6 140 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 ALG10BQ5I7T1 473 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 GCNT6Q5T4J0 391 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 FAM166AQ6J272 317 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 KRT80Q6KB66 452 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 C6orf89Q6UWU4 347 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 NHLRC1Q6VVB1 395 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 MSANTD1Q6ZTZ1 278 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 CDK20Q8IZL9 346 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 TMEM123Q8N131 208 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 GPR137CQ8N3F9 429 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 OR8H1Q8NGG4 311 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 BBS10Q8TAM1 723 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 FGFBP3Q8TAT2 258 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 MAGEE2Q8TD90 523 aaPredicted RBP5.36□□□□□ -1.55
NUP88-212ENST00000576708 MOGAT1Q96PD6 335 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 CPPED1Q9BRF8 314 aaPredicted RBP5.36□□□□□ -1.55
NUP88-212ENST00000576708 C19orf24Q9BVV8 132 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 TPK1Q9H3S4 243 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 CACYBPQ9HB71 228 aaKnown RBP5.36□□□□□ -1.55
NUP88-212ENST00000576708 SLCO1B3Q9NPD5 702 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 SLC52A3Q9NQ40 469 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 MRGBPQ9NV56 204 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 TMEM160Q9NX00 188 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 MED29Q9NX70 200 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 CCDC167Q9P0B6 97 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 VAPAQ9P0L0 249 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 KCNS2Q9ULS6 477 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 FZR1Q9UM11 496 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 RCE1Q9Y256 329 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 HEATR1Q9H583 2144 aaKnown RBP5.36□□□□□ -1.55
NUP88-212ENST00000576708 MXRA5Q9NR99 2828 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 PLCE1Q9P212 2302 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 ARFGEF3Q5TH69 2177 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 TRAV36DV7A0A075B6V5 113 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 A0A087WUJ7 227 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 TRBV5-3A0A0A0MS03 114 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 M0R3H8 397 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 NDUFS8O00217 210 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 AIM2O14862 343 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 FZD7O75084 574 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 OPN1SWP03999 348 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 ADRA2AP08913 450 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 CD79AP11912 226 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 NQO1P15559 274 aaKnown RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 ZNF23P17027 643 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 TCN1P20061 433 aaPredicted RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 PRKAR1BP31321 381 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 PPOXP50336 477 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SEC24CP53992 1094 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SLC18A1P54219 525 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 CDH12P55289 794 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SH3BGRP55822 239 aaPredicted RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 RGS8P57771 180 aaPredicted RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 STX1BP61266 288 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 POU3F1Q03052 451 aaPredicted RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 COX10Q12887 443 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SNTB2Q13425 540 aaKnown RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 CAMK2DQ13557 499 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SCARB2Q14108 478 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 DAG1Q14118 895 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SELPLGQ14242 412 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 MAD2L1BPQ15013 274 aaPredicted RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 AGKQ53H12 422 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 LRIF1Q5T3J3 769 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 FAM69AQ5T7M9 428 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 REEP3Q6NUK4 255 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 DHRS4L2Q6PKH6 230 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 WDR88Q6ZMY6 472 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 ZNF813Q6ZN06 617 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 Q6ZRM9 215 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 H1FNTQ75WM6 255 aaPredicted RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 CROCCP2Q86T23 111 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 LRP11Q86VZ4 500 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 CARM1Q86X55 608 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 RBM45Q8IUH3 476 aaKnown RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 UEVLDQ8IX04 471 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 C20orf196Q8IYI0 205 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 C10orf53Q8N6V4 93 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 LSMEM1Q8N8F7 131 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SMYD1Q8NB12 490 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 NUP37Q8NFH4 326 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 OR4F15Q8NGB8 312 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 OR4D11Q8NGI4 311 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 CKAP2Q8WWK9 683 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 ST8SIA2Q92186 375 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SLC38A4Q969I6 547 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 SPDL1Q96EA4 605 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 THOC1Q96FV9 657 aaKnown RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 SNX18Q96RF0 628 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 MRPL37Q9BZE1 423 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms