RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 IFT20Q8IY31 132 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 LSMEM1Q8N8F7 131 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 OR6S1Q8NH40 331 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 OR6X1Q8NH79 312 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 RAB40AQ8WXH6 277 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZIM3Q96PE6 472 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 SSBP3Q9BWW4 388 aaPredicted RBP13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 SLC19A3Q9BZV2 496 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 SELENONQ9NZV5 590 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 KLHL21Q9UJP4 597 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 LRCH1Q9Y2L9 728 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 IGHV2-70DA0A0C4DH43 119 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 CEACAM18A8MTB9 384 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 RFXANKO14593 260 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 MELTFP08582 738 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 WNT2P09544 360 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 CSF1P09603 554 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 VSIG8P0DPA2 414 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 MELKQ14680 651 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 CEP85LQ5SZL2 805 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 MBNL2Q5VZF2 373 aaKnown RBP13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 TMEM86BQ8N661 226 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZNF283Q8N7M2 679 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 MRAPQ8TCY5 172 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 SLC35B4Q969S0 331 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 SLC47A1Q96FL8 570 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
CTDNEP1-211ENST00000575783 ITM2AO43736 263 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 TIMM8AO60220 97 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 MMP7P09237 267 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 LBPP18428 481 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 IL12AP29459 219 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 MDH2P40926 338 aaKnown RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 GNB2P62879 340 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZMAT1Q5H9K5 638 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 GPR157Q5UAW9 335 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 RUSC1-AS1Q66K80 236 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 UNQ6126/PRO20091Q6UXV3 157 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 REC114Q7Z4M0 266 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 C1orf174Q8IYL3 243 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZNF781Q8N8C0 355 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 MNS1Q8NEH6 495 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 ABHD4Q8TB40 342 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 TCP10LQ8TDR4 215 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 UBLCP1Q8WVY7 318 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 THOC1Q96FV9 657 aaKnown RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 SLC25A44Q96H78 314 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 FAM71F1Q96KD3 344 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 PPP1R3CQ9UQK1 317 aa13.61□□□□□ -0.23
CTDNEP1-211ENST00000575783 TLDC2A0PJX2 215 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 C5orf63A6NC05 138 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 PIP5K1CO60331 668 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZNF205O95201 554 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 ANP32DO95626 131 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 THRBP10828 461 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 RPS2P15880 293 aaKnown RBP13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 TNFRSF1AP19438 455 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 TNFSF4P23510 183 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 GDI2P50395 445 aaKnown RBP13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 PPP1CBP62140 327 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 LRRC74AQ0VAA2 488 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 CDK5R2Q13319 367 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 TTMPQ5BVD1 217 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 MTX3Q5HYI7 312 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 FAM91A1Q658Y4 838 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 MUC20Q8N307 709 aaPredicted RBP13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 OR2Z1Q8NG97 314 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 OR5J2Q8NH18 312 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 DYRK2Q92630 601 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 POM121L2Q96KW2 1035 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 SAMD8Q96LT4 415 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 SIGLEC11Q96RL6 698 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 KCNN2Q9H2S1 579 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 TPT1P8Q9HAU6 139 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 CCNB1IP1Q9NPC3 277 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 MKS1Q9NXB0 559 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 CGGBP1Q9UFW8 167 aaPredicted RBP13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 POMT1Q9Y6A1 747 aa13.6□□□□□ -0.23
CTDNEP1-211ENST00000575783 LOC100509620A0A075B734 347 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 KIR2DS1A0A191URI9 304 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 RNF13O43567 381 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 GPR137BO60478 399 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 BPGMP07738 259 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 NUDT7P0C024 238 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 PGA4P0DJD7 388 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 PGA3P0DJD8 388 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZNF84P51523 738 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 LOXL3P58215 753 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 CLRN1P58418 232 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 FGF12P61328 243 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 VAX1Q5SQQ9 334 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 KPRPQ5T749 579 aaPredicted RBP13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 SAMD5Q5TGI4 173 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZNF774Q6NX45 483 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 RFPL4BQ6ZWI9 263 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 COMTD1Q86VU5 262 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 KLBQ86Z14 1044 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 AKR7LQ8NHP1 331 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 TBC1D15Q8TC07 691 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms