RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 GABRG1Q8N1C3 465 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 OR5M9Q8NGP3 310 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 GPX8Q8TED1 209 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 MMABQ96EY8 250 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-206ENST00000573852 MFFQ9GZY8 342 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 GPR160Q9UJ42 338 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 GMEB2Q9UKD1 530 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 GTF2A1LQ9UNN4 478 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 C11orf98E9PRG8 122 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 ITGB2P05107 769 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 MPGP29372 298 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 SLC17A1Q14916 467 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 OR8B4Q96RC9 309 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 GAL3ST1Q99999 423 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 B3GNT4Q9C0J1 378 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 NXF5Q9H1B4 397 aaKnown RBP17.21■□□□□ 0.35
SCARF1-206ENST00000573852 PRODH2Q9UF12 536 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 FBXL2Q9UKC9 423 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 MYO9BQ13459 2157 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 OR5K4A6NMS3 321 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 RLN2P04090 185 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 CTHP32929 405 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 FDX2Q6P4F2 183 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 TFAP2EQ6VUC0 442 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 PDZD9Q8IXQ8 264 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 ZNF454Q8N9F8 522 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 OR1J4Q8NGS1 313 aa17.21■□□□□ 0.35
SCARF1-206ENST00000573852 TOE1Q96GM8 510 aaKnown RBP17.21■□□□□ 0.35
SCARF1-206ENST00000573852 TRAV14DV4A0A0A6YYC5 116 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 C17orf105B2RV13 164 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 WISP1O95388 367 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 IL33O95760 270 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 HLA-DQA2P01906 255 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 RPA2P15927 270 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 LY6G6FQ5SQ64 297 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 OR6K3Q8NGY3 331 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 SLC25A28Q96A46 364 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 SEH1LQ96EE3 360 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 ADAM19Q9H013 955 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 C1orf198Q9H425 327 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 EPHA6Q9UF33 1036 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 VCANP13611 3396 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 AQP8O94778 261 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 NSA2O95478 260 aaKnown RBP17.2■□□□□ 0.34
SCARF1-206ENST00000573852 CENPAP49450 140 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 TOMM34Q15785 309 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-206ENST00000573852 HSD17B13Q7Z5P4 300 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-206ENST00000573852 PRR22Q8IZ63 422 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 RELL2Q8NC24 303 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-206ENST00000573852 ALX4Q9H161 411 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-206ENST00000573852 ZNF230Q9UIE0 474 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-206ENST00000573852 HS3ST3A1Q9Y663 406 aa17.2■□□□□ 0.34
SCARF1-206ENST00000573852 M0QYG6 137 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 PHYHO14832 338 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 NUPL2O15504 423 aaKnown RBP17.19■□□□□ 0.34
SCARF1-206ENST00000573852 PLGP00747 810 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-206ENST00000573852 OR4E1P0C645 316 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 HSD17B7P56937 341 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 TMEM205Q6UW68 189 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 FAM160A2Q8N612 972 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-206ENST00000573852 ADOQ96SZ5 270 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 MAP3K3Q99759 626 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 B9D1Q9UPM9 204 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 BLACEA4D250 179 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 HSPB2A8KAH6 182 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 HPP00738 406 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 BGLAPP02818 100 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 SLC37A1P57057 533 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 SKP1P63208 163 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 MFGE8Q08431 387 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-206ENST00000573852 ZNF273Q14593 569 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 HSPB2Q16082 182 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 PTPMT1Q8WUK0 201 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-206ENST00000573852 TINAGL1Q9GZM7 467 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-206ENST00000573852 SLC17A5Q9NRA2 495 aa17.19■□□□□ 0.34
SCARF1-206ENST00000573852 RFPL4AA6NLU0 287 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 B4DGG1 531 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 RFPL4AL1F8VTS6 287 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 H3BUI4 141 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 SDC3O75056 442 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 RABIFP47224 123 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 TMEM225Q6GV28 225 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 TMED4Q7Z7H5 227 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 ZNF679Q8IYX0 411 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 GALNT16Q8N428 558 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 C12orf45Q8N5I9 185 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-206ENST00000573852 ESX1Q8N693 406 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 RNF128Q8TEB7 428 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 PBX4Q9BYU1 374 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 MRPL22Q9NWU5 206 aaKnown RBP17.18■□□□□ 0.34
SCARF1-206ENST00000573852 TMEM82A0PJX8 343 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 D6RAR5 112 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 RAB3DO95716 219 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 ZNF117Q03924 483 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 SSBP1Q04837 148 aaKnown RBP17.18■□□□□ 0.34
SCARF1-206ENST00000573852 CCINQ13939 588 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 ETFDHQ16134 617 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 TEX30Q5JUR7 227 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 NDUFAF7Q7L592 441 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms